| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_34570 |
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| Symbol | |
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| ID | 8388780 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 3761307 |
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| End bp | 3762953 |
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| Gene Length | 1647 bp |
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| Protein Length | 548 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644977478 |
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| Product | thiamine biosynthesis protein ThiC |
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| Protein accession | YP_003135247 |
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| Protein GI | 257057415 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0422] Thiamine biosynthesis protein ThiC |
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| TIGRFAM ID | [TIGR00190] thiamine biosynthesis protein ThiC |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCACGGTG CCGACCGGGA GACCTCCGAC GTCAAGCCCA CCGTCACCAC CGGTCCGATC
ACCGGTTCCC GCAAGGTCTA TCTCGAAACC GAGTCAGGAC TTCGGGTCCC CGTTCGACGC
ATCGAGCTGT CGAACGGGGA GCATTTCGAC GTCTACGACA CCTCCGGCCC CTACACCGAT
CCACAGGCCA CAATAGACGT CCACAAAGGA CTACCTAAAC TGCGGGCCCC GTGGATCGAA
GGCCGGGAGC ACAAGACCCA GCTCGGCTGG GCGAAAGCCG GGGTCATCAC CCCGGAGATG
GAGTTCATCG CCGCACGGGA ACGCGTCGAC CCCGAGTTCG TCCGTTCCGA GGTGGCCCGC
GGACGGGCGG TCATCCCCGC CAACCGCAAC CACCCCGAGT CCGAGCCGAT GATCATCGGC
AAGAACTTCC TCGTCAAGGT CAACGCCAAC ATGGGCAACT CCGCCGTGTG GTCGTCGGTG
GAGGAGGAGG TCGACAAGAT GGTGTGGGCC ACCCGTTGGG GTGCCGACAC CGTCATGGAC
CTGTCCACGG GCAAACGTAT CCACGAGACC CGCGAGTGGA TCCTGCGCAA CTCCCCCGTC
CCCGTCGGGA CCGTGCCGAT CTACCAGGCG CTGGAGAAGG TCGGCGGTGA TCCGACGAAG
CTGTCGTGGG AGGTCTACCG CGACACCGTG ATCGAGCAGT GCGAGCAGGG TGTCGACTAC
ATGACCGTCC ATGCGGGAGT GTTGCTCCGG TATGTGCCGC TGACCGCCAA CCGGGTCACC
GGCATCGTCT CCCGCGGCGG TTCGATCATG GCCGCGTGGT GCCTGGCACA CCACAAGGAA
TCGTTCCTCT ACACGCATTT CGAGGAACTG TGCGACATCC TCCGCGAATA CGACGTGACC
TTCTCCCTCG GCGACGGCCT GCGCCCGGGC TCCATCGCCG ACGCCAACGA CCGCGCCCAG
TTCGCCGAGC TGGAGACGTT GGGCGAACTC ACCCGCATCG CACGGGAACG CGACGTGCAG
GTGATGATCG AAGGCCCGGG GCACGTGCCC ATGCACAAGA TCAAGGAGAA CGTGGAACGG
CAGGAGCGGC TCTGCGACGA GGCGCCGTTC TACACGCTCG GCCCCCTGGC CACCGACATC
GCACCGGCCT ACGACCACAT CACGTCGGCC ATCGGGGCGG CGCAGATCGC CTGGTACGGC
ACGGCGATGC TGTGTTACGT CACGCCGAAG GAACACCTCG GTCTGCCCAA CCGGGACGAC
GTGAAGACCG GTGTCATCTC GTACAAGATC GCCGCACACG CCGCCGACCT CGCCAAGGGC
CACCCGTACG CGCAGGAGTG GGACGACGCG TTGTCGAAGG CCCGGTTCGA GTTCCGCTGG
AACGACCAGT TCAACCTCTC CCTGGACCCG GACACCGCGC GTTCGTTCCA TGACGAGACG
CTGCCCGCGG AACCGGCCAA GACGGCGCAC TTCTGCTCCA TGTGCGGGCC GAAGTTCTGT
TCCATGCGCA TCACCCAGGA CGTTCGTGCC TACGCCGAGG AACACGGCCT GACGAGTGTC
GAGGCCATCG AGGCGGGCAT GCGGGAGAAG TCCCGCGAGT TCACCGAGAA GGGCGGACAG
GTGTATCTAC CGGTGGTGGA CCGATGA
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| Protein sequence | MHGADRETSD VKPTVTTGPI TGSRKVYLET ESGLRVPVRR IELSNGEHFD VYDTSGPYTD
PQATIDVHKG LPKLRAPWIE GREHKTQLGW AKAGVITPEM EFIAARERVD PEFVRSEVAR
GRAVIPANRN HPESEPMIIG KNFLVKVNAN MGNSAVWSSV EEEVDKMVWA TRWGADTVMD
LSTGKRIHET REWILRNSPV PVGTVPIYQA LEKVGGDPTK LSWEVYRDTV IEQCEQGVDY
MTVHAGVLLR YVPLTANRVT GIVSRGGSIM AAWCLAHHKE SFLYTHFEEL CDILREYDVT
FSLGDGLRPG SIADANDRAQ FAELETLGEL TRIARERDVQ VMIEGPGHVP MHKIKENVER
QERLCDEAPF YTLGPLATDI APAYDHITSA IGAAQIAWYG TAMLCYVTPK EHLGLPNRDD
VKTGVISYKI AAHAADLAKG HPYAQEWDDA LSKARFEFRW NDQFNLSLDP DTARSFHDET
LPAEPAKTAH FCSMCGPKFC SMRITQDVRA YAEEHGLTSV EAIEAGMREK SREFTEKGGQ
VYLPVVDR
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