Gene Svir_34420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_34420 
Symbol 
ID8388766 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3748384 
End bp3749379 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content65% 
IMG OID644977464 
ProductABC-type enterochelin transport system, permease component 
Protein accessionYP_003135233 
Protein GI257057401 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4605] ABC-type enterochelin transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGAC CACAGCTCGA CCTGAAGCGG CGAACCCTAT CGGGCGAGGC GGGGGGACGG 
CGCGTCCTCG GCGTACTCAC CGTCGTGGCG CTGGCGACCG TCGTGGCGTT CGGCACCATC
GGCCTGACCG GGAACCTGGA GTACGCGCTG GGGCTTCGCC TGCGGAAGGT GGCGGCCATG
ATCGTGGTGG GGGTCGCCGT CGGCTACTCC AGCGTGCTGT TCCAGACCGT GACGAACAAC
CGCATCCTCA CCCCCCAGAT CATGGGGTTC GACTCGCTGT TCGTCCTCAT CCAGACACTG
ATCGTGTACT TCGCGGGCGC GATCGCGCTC AGCAGCACCG ATCCGCGTCT GCTCTTCGCG
GTCCAATCCG GACTGATGAT CACGTTCGCG TTCGCGCTGC ACCGGTGGTT GTTCGACCGC
AACAGCCGCG ACCTCTACCT GCTCGTGCTC GTCGGGGTCA TCTTCGGAAC GCTGTTCTCC
AGCCTGTCGT CCCTGGCGTC CCGGTTGATC AACCCGAACG ACTTCGTGAC ATTGCAGGAC
AGCCTCTTCG CGAGCTTCAA CGCGGTGGAC GAGAGCCTGC TGTGGTTCTC GGCCGGAGTG
CTCGGCTTAC TCGGGGTCTG GGGTACGCGG TTGTTCCGCA AGCTGGACGT CGTGGCGCTC
GGCCGGGACA CGGCGATCGG TCTCGGTGTC CATCACAGGT CCGTGGTCAA CCGCAGCCTC
GTGATCATCG CGGTCCTGGT CTCGGTGTCC ACGGCCCTCG TCGGCCCCGT CATGTTCCTC
GGAGTGCTGG TCGCCAACCT GGCCCGACAA CTCACCCGCA CATTCCGCCA CAGGATCGTC
GTACCCGCCG CCTCGCTGAT CGCGATCATC ACCCTCATCG GTGGCCAGCT CGTCCTGGAA
CAGGTGCTCG GCATGGACAC CGCACTCAGC GTGGTCATCA ACTTCGGCGG CGGTATCTAC
TTCCTCGTCC TGCTCGTCCG GGAGTCCACA CGATGA
 
Protein sequence
MTRPQLDLKR RTLSGEAGGR RVLGVLTVVA LATVVAFGTI GLTGNLEYAL GLRLRKVAAM 
IVVGVAVGYS SVLFQTVTNN RILTPQIMGF DSLFVLIQTL IVYFAGAIAL SSTDPRLLFA
VQSGLMITFA FALHRWLFDR NSRDLYLLVL VGVIFGTLFS SLSSLASRLI NPNDFVTLQD
SLFASFNAVD ESLLWFSAGV LGLLGVWGTR LFRKLDVVAL GRDTAIGLGV HHRSVVNRSL
VIIAVLVSVS TALVGPVMFL GVLVANLARQ LTRTFRHRIV VPAASLIAII TLIGGQLVLE
QVLGMDTALS VVINFGGGIY FLVLLVREST R