Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_33890 |
Symbol | |
ID | 8388713 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 3689014 |
End bp | 3691263 |
Gene Length | 2250 bp |
Protein Length | 749 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644977411 |
Product | glycosyl transferase |
Protein accession | YP_003135180 |
Protein GI | 257057348 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.47583 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCGGGGT TCCTCCGCCG CCACTGGCTG CTGCTCCTCC TGCTCACCGG TGGTGTCACG CTGCGGGTGT TGGTGTGGCT GGCGTACGAA CCCGCTCTGC TCTACATCGA CAGCTTCCGC TACCTGGGGA ATCTCGAAGC CCTACGGCCC ACCGATCTCA ACCCGCTCGG GTACACGGTG GTGCTCAAGC TGCTGCTCTC CTTCGGCGGC CTGGCGTTCG TCCAAGCGGT ACAGCACCTG GTCGGGGTGC TGCTCGCGGT GTCGCTGTAC GCGCTCGTCC TGCGGTACAC GTCGCGGACC TGGATCGGCG CGCTGGCCTG CGCCCCCGTG TTGCTCGACG CCTACCAGCT GCAGATCGAG GCGCTCATCA TGTCGGAACT GTGGTTCCAG GCCCTTCTGG TGGGCGCGTT GTGGGCGTTG CTCGGGAAGG GGGAGCCGAC AGGGGGACGG GCCGCTGTGG CCGGGGTGCT CATCGGCTGC GCCGTGATCA CGAGGACCAT CGGCTTCACC CTGGTGGTGC CGATGGTGGG GTACCTGGTG TTGGCGGGCG GGGCGTGGCG CAGCAGGGCC GGATGGAGAC GCATCGCCGT GCGCGGTACC GCCGGGCTGC TCGGCGTCGC CGTCGTCCTG CTGCCGTACT CGGCGTACTT CCGTTCCCAG GCCGGTTACT GGGGGCTCAC CGGCGCGACC GGCAACGTGC TCTACGGCCG CACGGCCACC GTCGCCGACT GTGCCGAGTT ACCCCAGGAG GATGCGGGAC TGCAGCTGTT CTGTCCCGAC GAACCTCGTG ACGAGCGTCC GGGCATCGAC TACTACACGC ATTTCGTGTA CGGCGATCCG AGTTGGCCCC CGGAGGGGTT GCCCGACGGC AGGACCAAGG AGGAACTGGC CAACCAGTTC ACCCTGGCGG TCGTCCGCAA TCAGCCGTTC GACTTCTTCG GCTCGATCGC GAAGGACTTC CTGAAGAACT TCGACTCGCT CAAACGCACC CACCCCAAGG ACGTGCCCGT CGAACGCTGG CACTTCCAGG TGACCTACCC CTATTACGAC ATCGGCCCCG ATTCGGTGGA GCGGTACAAC GCGGTGACGT ACGCCTACGA CGGCGTGCTG CCGGATTCCG ACACCGATCT GGCCTCGTTC CTGCGCGGAT ACCAGCTCGG CGGGGGCTAC ACCTGGGGGC CGCTGCTCGC CGCCTTCGCC ATGCTCGGGC TGCTCGCCAG CGTCGGGACC GGTCGGGCGC GGGCGTCGGG GCTGAGGTCG GCCGCGTTCC TCGCCACCGG TGGTGGACTG ATCATCCTGC TGGGGGCCGC GGCGTTCGAA TTCTCCTGGA GGTATCAACT TCCCGCACTG GTGCTCCTCC CTCTCGGGGG CGCATTGGGA CTCGCCGCGA TCCTGGGTAC ACGTTCCGGA GCATCGGGTG TGGCGACAGA ACGGAGGTCC GGATTGGACG AATACCCCGA CGAGGTCGAC GCCGAGGCGG TGGCCGACTT CCGCCAACGC TACGGTGACA ACCCACTCAC TCCGCTGGTC GTGGTGATCG CGGCGTACAA CGAGGCCCAG GGCATCGGCG CCGTACTACG CGGCATGCCC ACCCACGTGG GCGATGTGCC CGTGTCCACC CTCGTCGTGG TGGACGGGGC CACCGACGAC ACCGCCGCCG TCGCACACGA GGCCGGCGCG TACGTGTGCG TGGCCAGCCG TAACCGCGGT CAGGGGGCCG CACTGCGTCT CGGCTACCAC CTGGCCGGTG AATCCGGTGC GCGTTACATC GTCACCACCG ACGCCGACGG ACAGTACGAC AACAACGAGA TGCCGTTGCT GGTCAAACCG CTGCTCGACG ACACGGCCGA CTTCGTCACC GGTTCCCGCA GGCTCGGCAG CTACCAGCAC GACAGTGCCA TCCGCTGGCT CGGCGTCCGC GTGTTCTCCT GGATCGCCTC GTTGTTGACC CTGCGCAGGA TCACCGACAC CTCGTTCGGG TTCCGTGCGA TGAAGGCCGA GCTCGCGATG TCGGTGACAC TCCGGGAACC GCAGTATCAG TCCTCCGAGT TGTTACTCGG GGTCATGGCG CGGGGAGCGC GGGTGTTGGA GGTCCCGATG ACCATGCGAC TGCGCAACAA CGGCACCAGC AAGAAAGGCC GCAGCATCAA ATACGGGGCC AATTACGCGA GGGTCATGTT TTGGACCTGG CTTCGCGAGT ACGTGTTTCG TGGCGGAAAA CGAGCCGGTC GAGCAGCGCG AATTTCATGA
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Protein sequence | MPGFLRRHWL LLLLLTGGVT LRVLVWLAYE PALLYIDSFR YLGNLEALRP TDLNPLGYTV VLKLLLSFGG LAFVQAVQHL VGVLLAVSLY ALVLRYTSRT WIGALACAPV LLDAYQLQIE ALIMSELWFQ ALLVGALWAL LGKGEPTGGR AAVAGVLIGC AVITRTIGFT LVVPMVGYLV LAGGAWRSRA GWRRIAVRGT AGLLGVAVVL LPYSAYFRSQ AGYWGLTGAT GNVLYGRTAT VADCAELPQE DAGLQLFCPD EPRDERPGID YYTHFVYGDP SWPPEGLPDG RTKEELANQF TLAVVRNQPF DFFGSIAKDF LKNFDSLKRT HPKDVPVERW HFQVTYPYYD IGPDSVERYN AVTYAYDGVL PDSDTDLASF LRGYQLGGGY TWGPLLAAFA MLGLLASVGT GRARASGLRS AAFLATGGGL IILLGAAAFE FSWRYQLPAL VLLPLGGALG LAAILGTRSG ASGVATERRS GLDEYPDEVD AEAVADFRQR YGDNPLTPLV VVIAAYNEAQ GIGAVLRGMP THVGDVPVST LVVVDGATDD TAAVAHEAGA YVCVASRNRG QGAALRLGYH LAGESGARYI VTTDADGQYD NNEMPLLVKP LLDDTADFVT GSRRLGSYQH DSAIRWLGVR VFSWIASLLT LRRITDTSFG FRAMKAELAM SVTLREPQYQ SSELLLGVMA RGARVLEVPM TMRLRNNGTS KKGRSIKYGA NYARVMFWTW LREYVFRGGK RAGRAARIS
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