| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_33780 |
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| Symbol | |
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| ID | 8388702 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 3672999 |
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| End bp | 3674894 |
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| Gene Length | 1896 bp |
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| Protein Length | 631 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644977400 |
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| Product | DNA-binding transcriptional activator of the SARP family |
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| Protein accession | YP_003135169 |
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| Protein GI | 257057337 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3629] DNA-binding transcriptional activator of the SARP family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGAGTTCA AGCTCTTGGG GCCACTCGAG GTGGTACACG AAGGCCGATT AATCACTCCC
ACCGCGCCTA AATTACGCAG GGTGTTGGCT CTGCTGGTCT TGCGGAGCAA TCAGGTGGTG
ACTTTCGGGC AGGTCATCGA GGAGTTGTGG GACCAGCGGC CGCCGAATAG CGCCAGTACC
ACCATGCAGA CCTACATCTA CCAGATCCGA AAAATCTTTC GAATGAGCGA GGGAAACGAC
GGGGAATCCG TTTCCCTGCG GACCACTCCC GGTGGATACA TCCTCTCTGT TCCCCCTGAG
AAAATTGATG TGAATCAGTT CGATGAATTG CTCAAAATAG CTCGGGGAAA AAGTGATGAG
GGGGATCTGG AAGCGGCTGC TGAATTGTAT CGGGAAGCGT TGCAGATCTG GCGCGGCCCG
GCGCTCAGTG ATATTTCCTT GGGAACCCTG TTGCAGGCGG AGACAGTTCG GCTGGAGGAA
GTCAGGAAGA GTGCGCTGGA GCAACTCCTC GATCTCTATC TCGAACTCGG TCGGCACAAG
GAGCTCATCA GCGAACTGCT GTGGCTCACC AGCAAGGAGC CGACGCACGA GGGGTTCTTC
GCGCGGCTGA TGATCGCGCT GGCCCGCACC GGGCGGAGGA CCGAGGCCCT GAGCGTCTAT
CACCGGTGTC GCCGCAACCT CATCGAACAA CTCGGCCTGG AACCGTCGGC CGAACTGCAG
GAACTGCAAC ACTCTCTACT CGCGTCCGAC ACCGCGGCTC GTGAGCCACA ACCGATCGTG
GCCGCGCAGC GCAGGGAGGT CGTCGCCCGC ACCCCTCGTG GTCTGATCGG CCGGGGCCGG
GAGTACGAAC GCATCGTGCG GGAGCTGACC CGCTTTCGCG ACGACACCGT CTCGCCGGTG
GTGTTGGTGA CCGGACCCGC GGGCGTGGGG AAGACCGCCT TGGCGTTGGC GATCGCGCAA
GAGGTCGCTC CGATGTTCCC CGACGGCCGC TTCCTGGTGG ATCTGGAATG CGTCGACCGG
ACCCGCGACG AGGAGGCGTT CCAGCGGGTG CTGGACAGCT TGCTCACCCA GGTGGGGTTG
AGGGTCGACC AGACCGCCGG TGTGGAAGGC CGATTGACCG CGTTGCGCGA CTGGACCCGC
TCCCGACGCG CGTTGTTCGT CGTGGACAAC GCGGTCGACC TGGCCGCGTT GCTGCCGGCG
GGGTCCGGCT GTGCGGCGTT GGTGTTGACC CGGCACCGGA CCTACGACGA GCGCGTCACC
CAGTTCGTGG AACTGGCTCC GTTGTCGATC AGCGAGAGCG TCGAACTGCT CACCTCGGTG
CTCGGGGCGG ATCGGGCGAA GGGGGACCTC CGTGCCGCGG AGGAGCTTGC GGAGCTGTGC
GAGGGACTCC CGGCGGCACT CCGCGCCGTG GCCATCCGAT TGGCGACTCG GCCCCACTGG
ACGCTCGGGC AGATGGTGCT GCGACTGCGG GACCAACGCT GGGAGGCGGT GGAGTTCAAC
GTCGGCTCGT TGAACGTGCT GCGCAGCATC GGCCTCACCG TGCGGTCGCT GTCCTCGGAA
TGTCAGGACG CCTTCGTCAA ACTGGCGCTT CGGGCCGAAG ACGGGTTGAC GATCGAGGAA
GCGGCGTCGG TGCTCGACAC CGACGTCTTC ACCGCCGAGG AGATCCTCGA ACGTCTCGTC
GAGGCGCATC TGGCGGTGGC CGGGGTCGAT GAACGACACG AGAGCGGCAC GCACCCGTTC
CGCTACCGCT TCTCGCGGTT GCACGCCCTC GCGGCGCGAA CGGCGGATGC GGGTGAGGAC
GCCGATTCGA CGATCTCCGG GGCCGCGGAC GAACGTTCAG GGCTTACGAT GCCCGGCAAG
GCGACGGTGA TGGGTTTCGA ACGGACACTC GGCTGA
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| Protein sequence | MEFKLLGPLE VVHEGRLITP TAPKLRRVLA LLVLRSNQVV TFGQVIEELW DQRPPNSAST
TMQTYIYQIR KIFRMSEGND GESVSLRTTP GGYILSVPPE KIDVNQFDEL LKIARGKSDE
GDLEAAAELY REALQIWRGP ALSDISLGTL LQAETVRLEE VRKSALEQLL DLYLELGRHK
ELISELLWLT SKEPTHEGFF ARLMIALART GRRTEALSVY HRCRRNLIEQ LGLEPSAELQ
ELQHSLLASD TAAREPQPIV AAQRREVVAR TPRGLIGRGR EYERIVRELT RFRDDTVSPV
VLVTGPAGVG KTALALAIAQ EVAPMFPDGR FLVDLECVDR TRDEEAFQRV LDSLLTQVGL
RVDQTAGVEG RLTALRDWTR SRRALFVVDN AVDLAALLPA GSGCAALVLT RHRTYDERVT
QFVELAPLSI SESVELLTSV LGADRAKGDL RAAEELAELC EGLPAALRAV AIRLATRPHW
TLGQMVLRLR DQRWEAVEFN VGSLNVLRSI GLTVRSLSSE CQDAFVKLAL RAEDGLTIEE
AASVLDTDVF TAEEILERLV EAHLAVAGVD ERHESGTHPF RYRFSRLHAL AARTADAGED
ADSTISGAAD ERSGLTMPGK ATVMGFERTL G
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