Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_32430 |
Symbol | |
ID | 8388567 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 3516993 |
End bp | 3518795 |
Gene Length | 1803 bp |
Protein Length | 600 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644977270 |
Product | ATPase component of ABC transporters with duplicated ATPase domain protein |
Protein accession | YP_003135041 |
Protein GI | 257057209 |
COG category | [R] General function prediction only |
COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.775156 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.436846 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCAATC TGGTCAACCT GGAGTCGGTC AGCAAGTCCT ACGGCGAACG CATGCTGCTC GACGGCGTGT CCCTCGGCGT GGGTGAGGGT GAGCGCATCG GCGTCGTCGG TCTGAACGGC GGCGGTAAGA CGACCCTGCT CGAAGTGCTG GCCGGGATCA GCGAGCCCGA TTCGGGCAGG GTGAGCCACG CGCGGGGACT GCGCCTGGGG GTCGTCACGC AGCGCACCGA GTTGCCGGAA GGCAGCACGG TCGGCGGCGT GGTGCTGGCC GACTACGCCG CCGAGCACGA ATGGGCCTCC AACACCCGTG TCCGCTCGAT CGTCGAGGGG CTCGGCATCT CCGCCATCGG CTTCGACACC CCCACCGACA CCCTGTCGGG AGGGGAACGT CGCCGGGTCG CGTTGGCCGC CACGCTCGTG GCCGACCTGG ATCTGGTGGT GCTCGACGAA CCCACCAACC ACCTCGACGT CGAGGGGGTC CGCTGGCTGG CCGATCACCT GTTGTCACGC AAGACGGCGC TCGTGGTCGT CACTCACGAC CGCTGGTTCC TCGACACCGT GTGCGAGCGC ACGTGGGAAG TCGTGTCGGA CCCGGTGAAC ACGGCGTCCG GCGGGCGGGT GGAGCAGTAC GAGGGTGGCT ACGCGGACTG GGTGTTCGCG CGCGCCGAAC GCGCCCGGTT GGCCGCGGCG GCGGAGGAGA AGCGCCGAAA TCTCGCCCGC AAGGAACTCG CCTGGCTGCA GCGCGGTGCC AGGGCCCGCA CCTCCAAACC CCGCTACCGT GTCGAAGCCG CCGAGGCGTT GATCGCCGAC GTGCCCGAGC CGAGGAACCC GGCGGAGCTG CTGGCGTTCG CCAAACGACG TCTCGGCAAG ACGGTGCTCG AACTGGAGGA CGTCTCGCTC ACAGCCGGGG AGCGCACCCT GCTCGATCAC GTCACCTGGC GCATCGGCCC CGGGGACCGC ATCGGGATCG TCGGGGTCAA CGGGTCCGGC AAGACCACGC TGTTGCGCCT GTTGGCCGGG GAGGTCGAAC CGAGTACGGG CAAGCGCATC GAGGGCAAGA CGGTGCGCCT GGCGCATCTG AAACAGGAGC TCGACGATCT TCCGGGGGAT CTGCGGGTGT TGGAGGCCGT CGAGAAGGTC GCCTCGCGGG TGATGGTGGG CAAACACGAG TTGTCGGCCT CCCAACTCGC CGAGCGACTC GGTTTCGCCC GGACCCGGCA GTGGACCCCC GTCGAGGACC TCTCCGGTGG GGAACGCCGC CGACTGCAAC TGGTGCGGCT GCTGATGTCC GAGCCCAACG TGTTGTTGCT CGACGAGCCC ACCAACGACC TCGACATCGA CACCCTGCAG CAACTGGAGG ATCTGCTCGA CTCGTGGGCG GGCACGCTCG TGGTCGTCTC GCACGACCGG TACCTGGTCG AGCGCGTGTG TGACAGTGTC GTGGCCCTGT TCGGTGACGG CCGTATCACC CACCTGCCCG GGGGTATCGA CGAATACCTG GCCACCAGGG CCGAACGTGC GCGGCGGCAC CGGGAGGTCC GTGCTGAGCG GCCACCCCGG GAAGCCACTC CGACACAGAA GCTCAGTGCG GCCGAGTGGC GAGCGGCCAC GAAGGAATTG GCCAAATTGG AACGCAAACT CGACGCCGTG CACGAACGCG AGTCGCGATT GCATCGACAG CTCGCCGAGG CCGCAACGGA CCCTGATCGG CTCATGGAGC TGAACGGTGA GCTCAAGGCC GTGCTCGCGG AGAAAGACGA GCTCGAACGA CGGTGGCTGG AGATATCCGA GGCACTGGAG TGA
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Protein sequence | MANLVNLESV SKSYGERMLL DGVSLGVGEG ERIGVVGLNG GGKTTLLEVL AGISEPDSGR VSHARGLRLG VVTQRTELPE GSTVGGVVLA DYAAEHEWAS NTRVRSIVEG LGISAIGFDT PTDTLSGGER RRVALAATLV ADLDLVVLDE PTNHLDVEGV RWLADHLLSR KTALVVVTHD RWFLDTVCER TWEVVSDPVN TASGGRVEQY EGGYADWVFA RAERARLAAA AEEKRRNLAR KELAWLQRGA RARTSKPRYR VEAAEALIAD VPEPRNPAEL LAFAKRRLGK TVLELEDVSL TAGERTLLDH VTWRIGPGDR IGIVGVNGSG KTTLLRLLAG EVEPSTGKRI EGKTVRLAHL KQELDDLPGD LRVLEAVEKV ASRVMVGKHE LSASQLAERL GFARTRQWTP VEDLSGGERR RLQLVRLLMS EPNVLLLDEP TNDLDIDTLQ QLEDLLDSWA GTLVVVSHDR YLVERVCDSV VALFGDGRIT HLPGGIDEYL ATRAERARRH REVRAERPPR EATPTQKLSA AEWRAATKEL AKLERKLDAV HERESRLHRQ LAEAATDPDR LMELNGELKA VLAEKDELER RWLEISEALE
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