| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_32220 |
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| Symbol | |
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| ID | 8388546 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 3493824 |
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| End bp | 3495185 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644977249 |
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| Product | hypothetical protein |
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| Protein accession | YP_003135021 |
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| Protein GI | 257057189 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.229524 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGCCG TCAGTGACGC GACGGTGCGG TGGCTCGATG TTCCCGAACA GGAGCAGGCC
GCGCCCGCTC CGTTGGCGGG AGGTCAGCCG CCCGCGTCGG TATCGGTGAA CGGCAGCCTG
CCTGAGGCGC CTCCGATCGA GAAGCTGTGG GCGCCCGTCG AGCCGGTCAC GGGTTCGCTC
GGCATCCCGT CGACCGCGCT CGAGGCTTAC AAACGTGCCG CCGAGCGGGC GGCCGCCGAA
TACCCGGGTT GCAACATCGA CTGGGCGTTG CTCGCCAGCA TCGGGCGGAT CGAGTCGAAC
CACGCGCGTG GCGGATATGT CGACGGCAAC GGCGACGCGC GCGAGACCAT CCTCGGTCCG
GTGCTCGACG GAACGGGTGA CGTCGCCGCC ATCCCCGACA CCGACGGTGG CGCGTACGAC
GGGGACACGC GGTGGGACCG CGCTGTCGGA CCGATGCAGT TCATCCCGTC CACGTGGAAA
CGCTATGCCT CCGACGGTAA CGGCGACGGT GTGGCCGACC CCAACAACCT CTACGACTCC
ACGCTCGCCG CCGCCAGGTA CCTGTGCTCG GGCGGAGTCG ACCTGTCGGA TCCCGAGCAG
CTGCGTGCGG CCCTCTACCG CTACAACAAC TCGTGGTCGT ATGTGAACAC GGTGATCCGG
TGGGCCAAGG CGTATCGCAG CGGTGTGTCG GCGTTGCCCG ACAGCGATGT GCCCACCGCG
GTGCTGGTGC ACGCGTCGAA TCCGGTCAAG GACGAGTCGT CGGTTACCAG ACCGTCGCCT
GAACCGCCGA CGAAGCCCAC CAGGCCGGAA ACACCGGAGA AGCCGGACGG GCCCGACGCC
CCGACACCTG AGGACCCCCC GCCGTCAGAC GGTGAGGATA CGCCCCCATC GGACGGGGAG
GATCCCCCGC CCGGCGATGG TGAGGACTCA CCTCCGTCGG ATGGGGAGGA CCCGCCGCCC
GGCGACGGCG AGGACCCGCC CCCATCGGAT GGGGAGGATC CCCCGCCCGG CGACGGCGAG
GACCCCCCGC CGTCGGACGG TGAGGATCCG CCTCCGTCAG ACGGTGAGGA TCCGCCGGGT
GACGGTGAGG ACCCGGCTGA TCCGGGGGAG TGCGATCCCG AGGAAGAACC CGAAGAACCC
GAAGAACCCT CATCCTTTGA ACCGACGGGG GAACAGCCCG TGGAGCAGTC CTCGTCCGAG
GCCGCGTCGA CGGACGAGCC CACCGAATCG GACGAGTCCA CCGACCCGCC GTGCGACGAC
GAGTCGGACG ACGACACGGA GGAGGGGCAG CCGGAGCCCA CGTCGGGCAC CACGCCCTCG
GGCGCCTCGG CCACGCGGGA GCAGGAGCCG ACCGAGGATT AG
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| Protein sequence | MLAVSDATVR WLDVPEQEQA APAPLAGGQP PASVSVNGSL PEAPPIEKLW APVEPVTGSL
GIPSTALEAY KRAAERAAAE YPGCNIDWAL LASIGRIESN HARGGYVDGN GDARETILGP
VLDGTGDVAA IPDTDGGAYD GDTRWDRAVG PMQFIPSTWK RYASDGNGDG VADPNNLYDS
TLAAARYLCS GGVDLSDPEQ LRAALYRYNN SWSYVNTVIR WAKAYRSGVS ALPDSDVPTA
VLVHASNPVK DESSVTRPSP EPPTKPTRPE TPEKPDGPDA PTPEDPPPSD GEDTPPSDGE
DPPPGDGEDS PPSDGEDPPP GDGEDPPPSD GEDPPPGDGE DPPPSDGEDP PPSDGEDPPG
DGEDPADPGE CDPEEEPEEP EEPSSFEPTG EQPVEQSSSE AASTDEPTES DESTDPPCDD
ESDDDTEEGQ PEPTSGTTPS GASATREQEP TED
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