Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_32060 |
Symbol | |
ID | 8388530 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 3474741 |
End bp | 3475529 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644977233 |
Product | transcriptional regulator of sugar metabolism |
Protein accession | YP_003135006 |
Protein GI | 257057174 |
COG category | [G] Carbohydrate transport and metabolism [K] Transcription |
COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.134085 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.228776 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCAGTG ATACATCCGG CACCACACGC GGTCGCCAGG CCCGGCAGCA GCGCATCACG GACTTCGTCA TCGACCGTGG AACGGCGACG GTGGCCGACC TGGTCGAGCT CACCGGCGTC AGTCATATGA CGGTCCATCG AGACATCGAC GAGCTCGCGC GACGAGGGGT CCTGCGCAAA TTCCGCGGCG GGGTGTCCGC ACTGCCCTCC ACCGTGTTCG AAAGCAACGC CGAGTACCGG CTCGGGGTGC ACGTCGAGGC CAAGGCCGCT ATCGCGCGGC AGGCGGCGAC GCTCGTCGAA CCCGGCATGT CGATCATGCT GGACGATTCG ACGACCGCGC TGTCGCTGGC CAAACTGCTC CCCGAATTCG TGCCGCTGAC CGTGGCGACC AACTACCTGC GCGGCATCGA GTTGCTCAAG GACGTCGACG ATCTGCGGCT CATCTGCCTC GGCGGCGACT ACTCCCGGAC CCACAACTCC TTTCTGGGGA TGCCCTGCCT GGAGGCGGTG GAGAGCATCA CGGTCGACAT GGTCTTCCTG TCCACCTCGG CCATGAACGT GGACATGACG TTCCACCAGG AGCCCGAGAT CGTGCTGGTG AAGCGGGCGA TGTTGGCCTC GGCCGAGACG AAGGTGCTGC TCATGGACTC CAGCAAGATG CCGCGGGCGG CGTTGCACCG GTTGGCGCCG ATCGCCGACT ACGACCGGTT GATCGTGGAT TCGGGCGTGG ACGAAGCGCT GGTCAAGGAG CTTCGGGAGC GTATCCCCGT CGACGTCGCT CCGCTCTGA
|
Protein sequence | MSSDTSGTTR GRQARQQRIT DFVIDRGTAT VADLVELTGV SHMTVHRDID ELARRGVLRK FRGGVSALPS TVFESNAEYR LGVHVEAKAA IARQAATLVE PGMSIMLDDS TTALSLAKLL PEFVPLTVAT NYLRGIELLK DVDDLRLICL GGDYSRTHNS FLGMPCLEAV ESITVDMVFL STSAMNVDMT FHQEPEIVLV KRAMLASAET KVLLMDSSKM PRAALHRLAP IADYDRLIVD SGVDEALVKE LRERIPVDVA PL
|
| |