Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_31990 |
Symbol | |
ID | 8388523 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 3469457 |
End bp | 3470464 |
Gene Length | 1008 bp |
Protein Length | 335 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644977226 |
Product | anti-sigma regulatory factor (Ser/Thr protein kinase) |
Protein accession | YP_003134999 |
Protein GI | 257057167 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2172] Anti-sigma regulatory factor (Ser/Thr protein kinase) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.447378 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.128313 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGGTG CGGCGCTTGC GGTGACGGGA CCTGTCCAGA TGACGCAGGC GCGCCAATTG GCCGGCCAAA CGGCACGGCG GTTGGGGTTC CCCCCTTCGG TGGTGGATCG GGTCGTGCTC GCGGCATCCG AGTTGGGCAC GAACCTGATG AAGTACGCCA CCGACGGACA GTTGGTGATC GTGCCGAGTC CCGGGGGACT CGACGTCCTG GCCATCGATC GCGGACCGGG TATCGAGCGG GTGCAGGACA GCATGCGGGA CGGGTTCTCC ACCACGGGCA CGTTGGGGCT CGGGCTCGGT GGAGTCAGGC GGCTGGCCGG GGAGTTCGAC ATATTCTCGC GTCACGGCGA GGGTACGACG GTGCTGGCGC GGTGGAGGCA TGACGAACCC GGCGGACCCG CGCGCGCTCA GGTGGTGGTC GGTGCCGCAC TGTCCGCGGC GCCGGGTGAG ACCCTGTGCG GGGACGATTG GGGCGTCGCC CACTCCGAGG GGGTGAGCAC CGTGGTGCTG AGCGACGGTC TCGGCCATGG CCCAGAGGCG GCGGATGCCA GTACGACGGT GGTGGAGAAA GTACTCGCCG ACCCGGCCGC GGCCCCCGAG GAGCTGATCG TGGCGTTGGA CGACAGCATG GCCACCAAAC GCGGCGCGAC CGTGGCCATC GCGCAGTTCC GCTCCGGAGA GCCGACGATG TCCTTCTGCG GGGTGGGGAA CTCCACCGTC CGATTGATCG CGAAGGACGG TAGTTGCGAA GCGCTGGTGT CCTCACCCGG CATCGTGGGG AAAAGACAGC GAAGCGGTAA GCGGGGAATA CTGACGGCGC GTCCGTGGAG CGGCCACGGT TGGCTCGTCA TACACACGGA CGGGGTTTCC GATCGGTGGA GCGTGGCGGA GAATCTCGAC GTGCTCCATC ATGATCCGGC CACGGCCGCG GGATGGTTGC TCGGAGCCTA CGGCAGGCGA CGGGACGACG CGTGTGTCGT CGTGGTCTCC GGAGGTGGAG CCACATGA
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Protein sequence | MNGAALAVTG PVQMTQARQL AGQTARRLGF PPSVVDRVVL AASELGTNLM KYATDGQLVI VPSPGGLDVL AIDRGPGIER VQDSMRDGFS TTGTLGLGLG GVRRLAGEFD IFSRHGEGTT VLARWRHDEP GGPARAQVVV GAALSAAPGE TLCGDDWGVA HSEGVSTVVL SDGLGHGPEA ADASTTVVEK VLADPAAAPE ELIVALDDSM ATKRGATVAI AQFRSGEPTM SFCGVGNSTV RLIAKDGSCE ALVSSPGIVG KRQRSGKRGI LTARPWSGHG WLVIHTDGVS DRWSVAENLD VLHHDPATAA GWLLGAYGRR RDDACVVVVS GGGAT
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