| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_31830 |
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| Symbol | |
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| ID | 8388507 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 3452118 |
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| End bp | 3453302 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644977210 |
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| Product | 4-hydroxyphenylpyruvate dioxygenase |
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| Protein accession | YP_003134983 |
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| Protein GI | 257057151 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG3185] 4-hydroxyphenylpyruvate dioxygenase and related hemolysins |
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| TIGRFAM ID | [TIGR01263] 4-hydroxyphenylpyruvate dioxygenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.905898 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAATC CAGCACTCGA CGACGTCAGC TACGACCAAC TCCGACAACT CGTCGGTCTG
GTCGACCACG ATCCGACCAA GGACCCCTTC CCCGTCAAGG CGATGGACGC GGTGGTCTTC
GTGGTCGGTA ACGCCACCCA GACCGCGCAC TTCTACCAGT CGGCGTTCGG CATGGACCTC
GTCGCCTACT CCGGACCGGA AACGGGCAAC CCCGAGTACA AATCGTTCGT CCTCAAGTCG
GGTTCCGCGC GGTTCGTGGT CAACGGCGGG GTGAAGCCGG ACTCGCCGCT GCTGGACCAC
CACCGCAAGC ACGGTGACGG CGTCATCGAC CTCGCGCTCG AAGTAGCCGA TGTGGACAAG
TGCGTCGAAC ACGCCAGGGC GAACGGGGCC ACGATCCTGG ACGAACCGTA CGAGGTCTCC
GACGAACACG GCACCGTACG CATGGCGGCC ATAGCGGCCT ACGGCGACAC CCGGCACACG
CTCGTGGACC GCTCCCGCTA CTCCGGCCCC TACCTGCCGG GATACGAGGC GCGTACCCGC
AGCGTGCCCA AGCCCGAGGG AGCACCGAAA CGGCTGTTCC AGGCCATCGA CCACTGTGTC
GGCAACGTCG AACTCGGCAA GATGGACGAA TGGGTGGGGT TCTACCACCG GGTCATGGGC
TTCGTGAACA TGGCCGAGTT CGTGGGTGAC GACATCGCCA CCGAGTATTC GGCGTTGATG
AGCAAGGTGG TCGCCAACGG TAACCACCGC GTCAAGTTCC CGCTCAACGA ACCCGCCATC
GGCAAGAAGA AGTCGCAGAT CGACGAGTTC CTCGAGTTCT ACGACGGCGC CGGCTGCCAG
CACATCGCGT TGGCCACCAA CGACATCGTC GGCACGGTCC AGGCGATGCG TCAGGCGGGT
GTGGAATTTT TGGACACGCC GGATTCGTAC TACGACGATC CGGAGTTGCG TGCCCGCATC
GGCGAGGTGC GGGTGCCGAT CGAGACGCTG AAGGAACACC GCATCCTCGT CGACCGCGAC
GAGGACGGCT ATCTGCTCCA GATCTTCACC AAACCGATCG GTGACCGACC CACCGTGTTC
TACGAACTCA TCGAGCGACA CGGCTCGCTC GGTTTCGGGA AGGGCAACTT CAAAGCCCTG
TTCGAGGCCA TCGAGCGGGA ACAGGCCCGT CGCGGCAACC TCTGA
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| Protein sequence | MANPALDDVS YDQLRQLVGL VDHDPTKDPF PVKAMDAVVF VVGNATQTAH FYQSAFGMDL
VAYSGPETGN PEYKSFVLKS GSARFVVNGG VKPDSPLLDH HRKHGDGVID LALEVADVDK
CVEHARANGA TILDEPYEVS DEHGTVRMAA IAAYGDTRHT LVDRSRYSGP YLPGYEARTR
SVPKPEGAPK RLFQAIDHCV GNVELGKMDE WVGFYHRVMG FVNMAEFVGD DIATEYSALM
SKVVANGNHR VKFPLNEPAI GKKKSQIDEF LEFYDGAGCQ HIALATNDIV GTVQAMRQAG
VEFLDTPDSY YDDPELRARI GEVRVPIETL KEHRILVDRD EDGYLLQIFT KPIGDRPTVF
YELIERHGSL GFGKGNFKAL FEAIEREQAR RGNL
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