| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_31440 |
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| Symbol | |
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| ID | 8388468 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 3407276 |
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| End bp | 3410236 |
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| Gene Length | 2961 bp |
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| Protein Length | 986 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644977171 |
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| Product | DNA repair ATPase |
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| Protein accession | YP_003134944 |
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| Protein GI | 257057112 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0419] ATPase involved in DNA repair |
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| TIGRFAM ID | [TIGR00618] exonuclease SbcC |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.651152 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGACTGC ACAGGCTGGA GGTTTGCGCG TTCGGCCCGT ATGCGGGACG CGAGGTCGTC
GACTTCGACG CTTTGGGCGC CGACGGACTG TTCCTGCTGC ACGGTGACAC GGGTGCGGGG
AAGACCACCC TGCTCGACGC GGTGGCGTTC GCGCTGTTCG GAGCGGTGCC GGGAGCCCGT
GGGCAGGTGA AGCGGTTGCG GTGCGACCTC GCCGACGCCG ACACCCCCAC CGAGGTCGTG
TTGGAGCTGA CCGTGCAGGG GCACCACCTG CGGATCGTTC GAAGCCCCGA GTACGAGCGG
CCGAAGCGAC GTGGTGAGGG TTACACCACA CAGCCGGCCA AGGCATCCCT GACCTGGCTC
AGTCCACCGC CCGACGGGGG GACGGCGGAA GCGGTCACCC GCATCGACGA GGTCGGACGG
ATCGTGGAGC GGTTGTTGGG CATGAACGCC CAGCAGTTCT TCCAGGTCGT GCTCCTCCCC
CAAGGGGAGT TCGCGAAATT CCTCCGCGCC GACACCACCG AGCGGGAGAA ACTGCTGGAA
CGCCTGTTCG GTACGGAGCG ATTCGCCGTG GTCGAGCAAT GGTTCCGCGA TCTGCGGGCC
GAGCGGAGAG CGGAACTCGA ACATCGGCGG TCCGGCGTGC GGGACTGGGT GGCCCGGTTG
GCCCAGGTGG CGGGGGAGGA GATCCCCGAG GACCCCGACC GGGACTGGGT GGTGACGCTG
CAGCGCCGGG CCGCCGCCGA GGTGGACACG GCGCGGCGGG AGGAGTCCGA CGCACGCCTG
GCCTGGGAGG AGGCACAAGC CCGACTACAG GAACGCAGGG CTGCGGCGGA ACGACTTCGG
CGGGTTCGAG CGGCGCACAC CCGCCTCGCT GAATTGGAGC AACGCTCGGA GGAGCGCGTT
CGATGGTCCA CCGAGTTGGA GGCGGCCAGG CGGGCCGCCA CGGTGGCCGA GCTGGTGGCC
GAGGCCGAGG CGGGTGAGGA GCAGTACGAC CGGGAGGTCG CGGAAGAGGA GGCGGCGGCA
CGGATCTGCC GCGAGCTCGG GTTCACCGAA CTCGATCTCG ATGTGGCCGA GCTGCGTGAT
CGCGCGGGTG CCCTACGCGA GGAAGCCGGC GGACTGTCCG GATTGGTCGA TCAGGCACAA
CGGCAACACG CCGACCGGCA GCGTCTTGAC GTACTCGACA AGCTGATCGC CGACGACAAG
GAACGAATCG CGATCGTCCA GTCGAAACTG GACGGTCTTC CTGAGCGTGT GGGCGAGTTG
CTGCGGCAAC GGGAACTGGC TGTGGAGGCT GAGGCCAAGC TCGAGGGGGT ACGTGCGAAG
GAAGCGGAAT TGACGGCATT GCTCGTCGAC GCGGAGGCGC TGCCGGAACT CGAACGCGAG
TTGGAGGACG CCCGCGCGGC CGAGAACACG GCCTTCGCGG CCTACAACGA AGCCAAGCAG
GCCTTGCTCG ACCTGCGAGA GCGGCGACTC GCGGGGATGG CGGCCGAGCT GGCGGCTCAG
CTCGCGGCGG GAGAACCGTG CCCGGTGTGC GGGTCGGAGC AACACCCCGA GCCCGCCGTG
GCGACCGATG ACGCGGTGAG TGAGGACGAG GAACGAGTCG CGGCCGAGCG CGAAGCGGAG
GCCGAGCGGC GTCGGGATGA GGCCACGGCG AAGCGGTACG AGGCGCAGCG GCGTCGGGAT
GCCGCCGCCC AACGTGTGGG GGAGCGTCGG GTCGACGAAC TCGCCGAGGA ACTCGCGCAA
GTGCGTGATG AACGCGATCG GCTCGGTGAA CACGCCGGGA AGTCGGAGGC GTTCGCGGCC
TCGGTGGAGG CGGCGAAGAA AGAGGAACAG TCCCTTATGG CCGAACGGGC CTCGTGCGAG
CGGTCGTTGA GCGAGAACGA GGCCGAGCGG AGTCTGTTGG CTGAACGGAT CGTGGAACGA
GAACGTGCCC TTGCCGAAGC GCGGGGGGAG TTCCCTGATG TTTCGGCCAG GCGGGATCAT
CTGCTGGCAC TGGGGCGAGC GGTGGACCGG TTGGCCGACG CGCGCACCGC GGTCAGCGCC
GCGGGGCGGC AGCGGGACGA ACGACGCCGG TCGATCGCCG AAGCCGCTCG GCGCGCCGGA
TTCGCCTCCG TGGACGAGGC CCTGGCGGCA GCGCGTCCTT CGGAGCGGAT CGCCGAACTG
GAACGGTTGA TCACGGATGC CGATGCCGAG GAGGCCGCGG CACGAGGTGT GCTCGACGAA
CCAGACCTCG CCGGAGTGTC CCCGGACGAC GAAGTGGACG TCGACTCGGC GGAAGCGGCG
GCACAGGAAG CGCAGAAGCG CTCCGAAACG GCGGTGGCAG CCGTGCACGC GGCCGAACGG
ACCGCACGCG AGCTGAACAC GTTGGCGCAG CGGTTCGAGG CCGCGTTGGC CGAGCTCGAG
CCCGTCGAGT GGGAGTTCGC CGAACTCGAT GCCCTCACCG ATGTCGTCAA CGGTCGAGGT
CAGAACGCTC GCCGCATGTC CTTGCGGTCA TATGTACTCG CGGCGAGGTT GGAGGAGGTG
GCCGTCGCCG CCACCGCGCG ACTGCGTTCG ATGAGTCAGG GCCGGTACTC GTTCGTGCAT
TCCGACGCGG CAGGAAGCCG GGGTACCCGT GGCGGACTCG GGCTCGACGT GCTCGACGAC
TATTCCGGCA TGGTCCGCCC CGCCAAGACG TTGTCCGGAG GCGAGTCGTT CCTCGCCTCG
CTGTCGCTGG CTCTCGGTCT CGCCGATGTG GTGGCGGCCG AAACGGGTGG TGCGCTGCTT
GACACGTTGT TCGTCGACGA GGGGTTCGGG ACGTTGGACA GCGAGACCCT CGACGTGGTG
ATGGGCGTGC TGGACGAGTT GCGCGCGGGT GGTCGCGTGG TGGGCTTGGT ATCGCATGTG
GAGGAACTAC GACAGCGGGT TCCCACGCGG CTACGGGTAC GCAAGTCGCG CAGCGGCTCA
ACCCTGGTGA TGGGCGGTTG A
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| Protein sequence | MRLHRLEVCA FGPYAGREVV DFDALGADGL FLLHGDTGAG KTTLLDAVAF ALFGAVPGAR
GQVKRLRCDL ADADTPTEVV LELTVQGHHL RIVRSPEYER PKRRGEGYTT QPAKASLTWL
SPPPDGGTAE AVTRIDEVGR IVERLLGMNA QQFFQVVLLP QGEFAKFLRA DTTEREKLLE
RLFGTERFAV VEQWFRDLRA ERRAELEHRR SGVRDWVARL AQVAGEEIPE DPDRDWVVTL
QRRAAAEVDT ARREESDARL AWEEAQARLQ ERRAAAERLR RVRAAHTRLA ELEQRSEERV
RWSTELEAAR RAATVAELVA EAEAGEEQYD REVAEEEAAA RICRELGFTE LDLDVAELRD
RAGALREEAG GLSGLVDQAQ RQHADRQRLD VLDKLIADDK ERIAIVQSKL DGLPERVGEL
LRQRELAVEA EAKLEGVRAK EAELTALLVD AEALPELERE LEDARAAENT AFAAYNEAKQ
ALLDLRERRL AGMAAELAAQ LAAGEPCPVC GSEQHPEPAV ATDDAVSEDE ERVAAEREAE
AERRRDEATA KRYEAQRRRD AAAQRVGERR VDELAEELAQ VRDERDRLGE HAGKSEAFAA
SVEAAKKEEQ SLMAERASCE RSLSENEAER SLLAERIVER ERALAEARGE FPDVSARRDH
LLALGRAVDR LADARTAVSA AGRQRDERRR SIAEAARRAG FASVDEALAA ARPSERIAEL
ERLITDADAE EAAARGVLDE PDLAGVSPDD EVDVDSAEAA AQEAQKRSET AVAAVHAAER
TARELNTLAQ RFEAALAELE PVEWEFAELD ALTDVVNGRG QNARRMSLRS YVLAARLEEV
AVAATARLRS MSQGRYSFVH SDAAGSRGTR GGLGLDVLDD YSGMVRPAKT LSGGESFLAS
LSLALGLADV VAAETGGALL DTLFVDEGFG TLDSETLDVV MGVLDELRAG GRVVGLVSHV
EELRQRVPTR LRVRKSRSGS TLVMGG
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