Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_31200 |
Symbol | |
ID | 8388444 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 3387670 |
End bp | 3389313 |
Gene Length | 1644 bp |
Protein Length | 547 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644977149 |
Product | ABC-type Fe3+ transport system, permease component |
Protein accession | YP_003134922 |
Protein GI | 257057090 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1178] ABC-type Fe3+ transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.393839 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.564354 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGCGAG CTACTCGAGG GCTGACCGCT CGGTCTCGTT CGGGTTCCCT CTGGGCGGCC GCCGCGCTCG GTGTCCTGCC CTTCGCCTTC CTCGGATTGT TCTTCGCCTG GCCGGTCGCC GCGATCATCC GATTCGGAGT CGCCGACGGG GGTGTGGTCG ACACTCTCGT CGAGGCGTCC ACGTGGCGGC TGGCCGGGTT CACGGTGGCG CAGGCACTGG CCGCCACGGT GGTCGCGGTG CTGGCCGGGT TCCCGCTCGC GTTCCTGTTG GCCCGGGTCC GGCTTCCCGG CATCACGGTG GTGCGCACGT TGGTCCTGGT GCCGTTCGTG CTGCCGACCG TGGTGGTGGG GCTTGCGTTC CGTGCGCTGT GGCCCGACGG GGGAGTGCTG AGCATCGTCG TGGCCAACGC CTTCTTCAAC ATCGCCGTCG TGGCTCGCAC GGTCGGCGGA CTGTGGTCGC AGCTCGACCC TCGGGTCGAG GACGCGGCCC GGTCCCTCGG CGCGTCGCGT TGGCGGGCGT TCTCCACGGT GACCCTGCCC GCGTTGTTGC CGGCGGTGTC CTCCGCCGCG GCCGTGGTGT TCCTGTTCTG CGCCACGAGT TTCGGCGTGG TGCTCATGCT CGGCGGCAAC CAGTACCGGA CGCTGGAGAC GGAGATCTAC CTCCGCACGG TGAACCTGCT CGACCTCTCC GGGGCCGCGG CGCTGTCGCT GGTGCAGCTC GGTGCGGTGA TCGCCGCTTT GGTGGTCGGG GCGTTGGCTC GTCGACGTAA CGAGACGGCG GCGCGACTGG GCTCGGCACG GCACGCCGCG CGCAGGCCGG AGGGCGGTGA ATGGGGTGTG GTGGCGGCCG CGGTCGTGGT ACTCGGTCTG CTGCTCACCC CGATCGTCGC GTTGGTGGTC CGCTCGATGC TGGGACGTGA GGGCTGGACC TTGGACGGCT ACCGCGCGTT GTCGGGCTTC GGACAGGACG GAGCGTTGAA CGTCACCGGT TGGGATGCGG CGTTGAACTC GTTGCGCACC GCCTCCGACG CGACGGTGCT CGCGCTGCTT GTGGGTGTGC TCGCGGCCGT GACCGTCGTG GTGTTGCGTC GGTTCCCGCA GCGGGGCGCC CGTGCGACCG GGGAGGTCGC CGACGCGGTC CTGATGCTGC CGCTCGGCGT GTCGGCTGTC ACCGTCGGTT TCGGATATCT GGTGACGCTC GGCGACCTCC CCTGGGATCT GCGCACCTCC CCGCTGTTGG TGCCGTTGGC GCAGGCGTTG GTGATCATTC CGATGGTGGT GCGGTTGGTC CTTCCCGTGC TGCGTTCGGT GGACGAGCGG TTACGGCAGG CCGCGGCGAC TTTGGGGGCC GGGCCGGTGC GGGTCTGGCG CGAGGTCGAT TTCCCGCTCG TGGCGCGGTC GTTGGTCGCC GCGGCGGCGT TCGGGTACGT CGTCGCATTG GGTGAGTTCG GCGCCACCAG TTTCCTCGCC CGTCCCGACG CGCCCACGCT GCCCGTCGCC GTCGCCGACC TCATCAGCCG CCCCGGCGAA CTGAACCACC TCATGGCCTA TGCGGGCTGT GTTCTGCTGA TGGTGGTCAC AGGACTCGTG GCGGCCCTGA TCGAAAGTGT GCGTGCGCCA CACGCACGGC TGGGAGAGTT CTGA
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Protein sequence | MARATRGLTA RSRSGSLWAA AALGVLPFAF LGLFFAWPVA AIIRFGVADG GVVDTLVEAS TWRLAGFTVA QALAATVVAV LAGFPLAFLL ARVRLPGITV VRTLVLVPFV LPTVVVGLAF RALWPDGGVL SIVVANAFFN IAVVARTVGG LWSQLDPRVE DAARSLGASR WRAFSTVTLP ALLPAVSSAA AVVFLFCATS FGVVLMLGGN QYRTLETEIY LRTVNLLDLS GAAALSLVQL GAVIAALVVG ALARRRNETA ARLGSARHAA RRPEGGEWGV VAAAVVVLGL LLTPIVALVV RSMLGREGWT LDGYRALSGF GQDGALNVTG WDAALNSLRT ASDATVLALL VGVLAAVTVV VLRRFPQRGA RATGEVADAV LMLPLGVSAV TVGFGYLVTL GDLPWDLRTS PLLVPLAQAL VIIPMVVRLV LPVLRSVDER LRQAAATLGA GPVRVWREVD FPLVARSLVA AAAFGYVVAL GEFGATSFLA RPDAPTLPVA VADLISRPGE LNHLMAYAGC VLLMVVTGLV AALIESVRAP HARLGEF
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