Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_31110 |
Symbol | |
ID | 8388435 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 3375180 |
End bp | 3376940 |
Gene Length | 1761 bp |
Protein Length | 586 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644977140 |
Product | ATPase component of various ABC-type transport systems with duplicated ATPase domain protein |
Protein accession | YP_003134913 |
Protein GI | 257057081 |
COG category | [R] General function prediction only |
COG ID | [COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase |
TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGCCGC AAGCGGCGGA TACGTCGTCG GAATCCGTGC TGTCCATATC GGACTTGAAG ATCTCCTTCT CGACCGAGGA CGGCGTCGTC GAAGCGGTCA AGGGAATCGG TTTCGACGTC GCCCCCGGCG AGATTCTGGC GATCGTTGGT GAGTCCGGGT CGGGCAAGTC GGTCACCTCG ATGTCGGTAC CCGGCCTGTT GCCGAAGACC GCCCACATCC AGGGCGAGCG CAGATTGGGC GCGGTTGACC TGAGTCACAT GACGTCCAAG GAGCTGCGCA AGCACCGCGG TAACGACGTC GCCATGATCT TCCAGGAGCC GATGACGGCT CTGAACCCCA TGTACACGAT CGGTTGGCAG GTCCGGGAAG CCCTGCTGGC CCACAAGGAC ATCTCCAAGC AGGCCGCCAA CAAACGAGCC ATCGAGCTGC TCGACATGGT CGGCATCCCC GAGCCGGAGA AACGCTTCAA GCAGTATCCG CACCAGCTCT CCGGCGGTCT GCGGCAGCGC GTGGTCATCG CCATCGCCAT CGCGTGCGAC CCCAAGGTCA TCATCGCCGA CGAACCCACC ACGGCGCTCG ACGTGACGGT ACAGGCGGAG ATCCTGGCCC TGTTGCGCAA ACTGCGCGAC ACCCTCAACA CCGCGATCGT GCTCATCACC CACGACATGG GCGTCGTGGC CGACCTGGCC GACCGCGTGG TGGTGATGTA CCAGGGCGAA ATCGTCGAGC AGGCCCCGGT GCACGAGCTG TTCAACAATC CGCAGCAAGA GTACACCAAG CGCCTGCTGG CCGCCGTTCC CGTGCTCGGC CAACGTCCCG AGGGGCGGCG GCTGTTGGAC ACCCCGAAGG TCGAGGTCGT CGAGAGCAAG ACCGACGAGG CGATCCGCAA GGCACACGAG GAACTGAAGC CGTACATCGA CGACAGCGCC CCTGCGCTGA AGATCGAGAA CCTCGTGCTG GAGTACCCCG GGAAGGGCCG GCAGGGGAAG AACCGCGCGG TCGACGACGT CTCGCTGCAC ATCGAACGAG GCGAGATCCT CGGCCTGGTC GGCGAATCGG GTTCCGGTAA GTCGACGGTC GGTCGCTGCG CCATTCGGCT GTTGAAACCC ACCTCGGGCA CCGTTTCCAT CGCGGGCACC GACATCACCA CGATGTCGCA CAAGAAGCTG CGTCCGCTGC GTCGGTACTT CTCGATCGTC TTCCAGGACC CGGCATCCAC TCTGGACCCG AAGATGACCA TCGGTGAGTC GATCGCCGAA CCGTTGGTCC TGCACAAGAT CCTGTCGGGC AAGGAACTGA CCGACCGGGT CACCGATCTG CTCGACAAGG TGCAGCTGTC TGGTCACTAC CGCAACCGCT ACCCGCACGA GTTGTCCGGT GGACAGCGGC AGCGGATCGC CATCGCCCGC GCGCTCGCAC TGAACCCCAA GCTGCTCATC GCCGACGAAC CCACCTCGGC GCTCGACGTG TCGGTGCAGG CGAAGATCCT CGACCTGTTC CTCGACCTGC AGCAGCATCT ACAGTTCGCG TGCCTGTTCA TCAGCCATGA CCTCGCCGTC GTGGACCTCC TCGCCGACCG CGTCGCCGTG ATGCAGCGGG GCAAGCTCGT CGAGGTGGGT ACCCGCGAAC AAGTGCTGCA CGCACCGCAG CAGGAGTACA CGAAGCGCCT GCTGTCCGCC GCACCGGTGG CCGACCCGGT GCTCCAGGCC GAACGCAGGC GCGCGTGGGA GGAAGGCCGC GTGGCGCCGG TCAAGGACTG A
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Protein sequence | MSPQAADTSS ESVLSISDLK ISFSTEDGVV EAVKGIGFDV APGEILAIVG ESGSGKSVTS MSVPGLLPKT AHIQGERRLG AVDLSHMTSK ELRKHRGNDV AMIFQEPMTA LNPMYTIGWQ VREALLAHKD ISKQAANKRA IELLDMVGIP EPEKRFKQYP HQLSGGLRQR VVIAIAIACD PKVIIADEPT TALDVTVQAE ILALLRKLRD TLNTAIVLIT HDMGVVADLA DRVVVMYQGE IVEQAPVHEL FNNPQQEYTK RLLAAVPVLG QRPEGRRLLD TPKVEVVESK TDEAIRKAHE ELKPYIDDSA PALKIENLVL EYPGKGRQGK NRAVDDVSLH IERGEILGLV GESGSGKSTV GRCAIRLLKP TSGTVSIAGT DITTMSHKKL RPLRRYFSIV FQDPASTLDP KMTIGESIAE PLVLHKILSG KELTDRVTDL LDKVQLSGHY RNRYPHELSG GQRQRIAIAR ALALNPKLLI ADEPTSALDV SVQAKILDLF LDLQQHLQFA CLFISHDLAV VDLLADRVAV MQRGKLVEVG TREQVLHAPQ QEYTKRLLSA APVADPVLQA ERRRAWEEGR VAPVKD
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