Gene Svir_31110 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_31110 
Symbol 
ID8388435 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3375180 
End bp3376940 
Gene Length1761 bp 
Protein Length586 aa 
Translation table11 
GC content65% 
IMG OID644977140 
ProductATPase component of various ABC-type transport systems with duplicated ATPase domain protein 
Protein accessionYP_003134913 
Protein GI257057081 
COG category[R] General function prediction only 
COG ID[COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase 
TIGRFAM ID[TIGR02323] phosphonate C-P lyase system protein PhnK 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCCGC AAGCGGCGGA TACGTCGTCG GAATCCGTGC TGTCCATATC GGACTTGAAG 
ATCTCCTTCT CGACCGAGGA CGGCGTCGTC GAAGCGGTCA AGGGAATCGG TTTCGACGTC
GCCCCCGGCG AGATTCTGGC GATCGTTGGT GAGTCCGGGT CGGGCAAGTC GGTCACCTCG
ATGTCGGTAC CCGGCCTGTT GCCGAAGACC GCCCACATCC AGGGCGAGCG CAGATTGGGC
GCGGTTGACC TGAGTCACAT GACGTCCAAG GAGCTGCGCA AGCACCGCGG TAACGACGTC
GCCATGATCT TCCAGGAGCC GATGACGGCT CTGAACCCCA TGTACACGAT CGGTTGGCAG
GTCCGGGAAG CCCTGCTGGC CCACAAGGAC ATCTCCAAGC AGGCCGCCAA CAAACGAGCC
ATCGAGCTGC TCGACATGGT CGGCATCCCC GAGCCGGAGA AACGCTTCAA GCAGTATCCG
CACCAGCTCT CCGGCGGTCT GCGGCAGCGC GTGGTCATCG CCATCGCCAT CGCGTGCGAC
CCCAAGGTCA TCATCGCCGA CGAACCCACC ACGGCGCTCG ACGTGACGGT ACAGGCGGAG
ATCCTGGCCC TGTTGCGCAA ACTGCGCGAC ACCCTCAACA CCGCGATCGT GCTCATCACC
CACGACATGG GCGTCGTGGC CGACCTGGCC GACCGCGTGG TGGTGATGTA CCAGGGCGAA
ATCGTCGAGC AGGCCCCGGT GCACGAGCTG TTCAACAATC CGCAGCAAGA GTACACCAAG
CGCCTGCTGG CCGCCGTTCC CGTGCTCGGC CAACGTCCCG AGGGGCGGCG GCTGTTGGAC
ACCCCGAAGG TCGAGGTCGT CGAGAGCAAG ACCGACGAGG CGATCCGCAA GGCACACGAG
GAACTGAAGC CGTACATCGA CGACAGCGCC CCTGCGCTGA AGATCGAGAA CCTCGTGCTG
GAGTACCCCG GGAAGGGCCG GCAGGGGAAG AACCGCGCGG TCGACGACGT CTCGCTGCAC
ATCGAACGAG GCGAGATCCT CGGCCTGGTC GGCGAATCGG GTTCCGGTAA GTCGACGGTC
GGTCGCTGCG CCATTCGGCT GTTGAAACCC ACCTCGGGCA CCGTTTCCAT CGCGGGCACC
GACATCACCA CGATGTCGCA CAAGAAGCTG CGTCCGCTGC GTCGGTACTT CTCGATCGTC
TTCCAGGACC CGGCATCCAC TCTGGACCCG AAGATGACCA TCGGTGAGTC GATCGCCGAA
CCGTTGGTCC TGCACAAGAT CCTGTCGGGC AAGGAACTGA CCGACCGGGT CACCGATCTG
CTCGACAAGG TGCAGCTGTC TGGTCACTAC CGCAACCGCT ACCCGCACGA GTTGTCCGGT
GGACAGCGGC AGCGGATCGC CATCGCCCGC GCGCTCGCAC TGAACCCCAA GCTGCTCATC
GCCGACGAAC CCACCTCGGC GCTCGACGTG TCGGTGCAGG CGAAGATCCT CGACCTGTTC
CTCGACCTGC AGCAGCATCT ACAGTTCGCG TGCCTGTTCA TCAGCCATGA CCTCGCCGTC
GTGGACCTCC TCGCCGACCG CGTCGCCGTG ATGCAGCGGG GCAAGCTCGT CGAGGTGGGT
ACCCGCGAAC AAGTGCTGCA CGCACCGCAG CAGGAGTACA CGAAGCGCCT GCTGTCCGCC
GCACCGGTGG CCGACCCGGT GCTCCAGGCC GAACGCAGGC GCGCGTGGGA GGAAGGCCGC
GTGGCGCCGG TCAAGGACTG A
 
Protein sequence
MSPQAADTSS ESVLSISDLK ISFSTEDGVV EAVKGIGFDV APGEILAIVG ESGSGKSVTS 
MSVPGLLPKT AHIQGERRLG AVDLSHMTSK ELRKHRGNDV AMIFQEPMTA LNPMYTIGWQ
VREALLAHKD ISKQAANKRA IELLDMVGIP EPEKRFKQYP HQLSGGLRQR VVIAIAIACD
PKVIIADEPT TALDVTVQAE ILALLRKLRD TLNTAIVLIT HDMGVVADLA DRVVVMYQGE
IVEQAPVHEL FNNPQQEYTK RLLAAVPVLG QRPEGRRLLD TPKVEVVESK TDEAIRKAHE
ELKPYIDDSA PALKIENLVL EYPGKGRQGK NRAVDDVSLH IERGEILGLV GESGSGKSTV
GRCAIRLLKP TSGTVSIAGT DITTMSHKKL RPLRRYFSIV FQDPASTLDP KMTIGESIAE
PLVLHKILSG KELTDRVTDL LDKVQLSGHY RNRYPHELSG GQRQRIAIAR ALALNPKLLI
ADEPTSALDV SVQAKILDLF LDLQQHLQFA CLFISHDLAV VDLLADRVAV MQRGKLVEVG
TREQVLHAPQ QEYTKRLLSA APVADPVLQA ERRRAWEEGR VAPVKD