Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_30930 |
Symbol | |
ID | 8388417 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 3356200 |
End bp | 3357933 |
Gene Length | 1734 bp |
Protein Length | 577 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644977122 |
Product | signal transduction histidine kinase |
Protein accession | YP_003134895 |
Protein GI | 257057063 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGGAC GACTGGCTTC GTCGAGCCGG TCGGCGTTGT CGGTGGCCAG GCGTGCAGCC GCGTTCGGTC GGCGCAGGAT GGTCGCCCTG GGGGAACTGT GGCAACGCTC GCTGCAGTTC CGGGTGACCA CGTCCACGCT CGCGCTGTCG TCGGCCGTCG TCTTCGTGCT GGGCGTGGTG CTGCAGAACC AGATCGTCGA CCGGCTCGTC GAGACCAAGG AGAGGGCTGC GCTCGAGCAG CTCCGAGTGG CCGTGCGTAC GGCGGAGAGT CAGCTCGTCG GCGACGCGGG TGAGAGCGAC TCCCTGCGTA AGCGCTTGTC CAGTGCGATC AAGGCCATCA CGAACGGTTC CGTGGGCACG CAGGACACGG AGAATTCCTC GGCAGGTGCG TTCGAGCCCG TGCTCGTGGC CGGGGACCCT CGGAGGGCCG TCGAGGAGGT CATCCACGCC GGGCCCCTGG AGAAGGTGCC CGGCGGGTTG ATGAACTACG CCGAGAACAA CCAGGTCGCG GTGCAGTACC ACACCGAGGA CGGCTCGACG TATCTCATCG TGGGCGCGCC GGTGACCACG GCCACGCGAC CGATCCAGCT GTACCTGCTG TTCCCCCTGA ACACCGAGCA GAACACCGTG GCCACGGTGC AGAACACGCT GTTGGTGGGG AGCGCGTTCC TGGTGGTTCT GCTCGCGGTG ATCACGTTCA TGGTGACCCG CCAGGTGGTG TTGCCGGTAC GCAGAGCGGC GGCAGCGGCG GAGGACTTCG CCGAGGGCGA TCTCGACCGC AGGCTCGACG TGGACGGGGA GGACGATCTG GCCAAACTCG CCGTGTCGTA CAACGAGATG GCGGCGAGTA TCCAGCGACA GATCCGTCAG CTCGAGGAAT TCGGCCAGCT GCAACGGCGG TTCACCTCGG ACGTGTCCCA CGAGCTGCGT ACCCCGCTCA CCACGGTGCG CATGGCGGCC GACGTGCTGT ACGCCTCGCG TGACGAATTC CCACCGGGGT TGAGTCGGTC GTCGGAGCTC CTCGTCAACG AGCTGGACCG TTTCGAGACC CTGCTGCGTG ACCTGCTGGA GATCAGCCGT CTCGACGCGG GTGTGGAGGA ACTCTCCGCG GAGTCGACCG ACGTGCGGTC CATCGTGCAC AGCGCCGTCG AGCAGGTACG GGGGGTGTTG GAGGGGAACA CGGGCAGCGA CATCGTGCTC GAACTCCCCG ACGAGGAGGT CACCGCGGAG GTCGACAGTC GACGGGTCGA GCGGATCCTG CGGAACCTGC TCGCCAACGC CGTGGACCAC GGCGAGGGAC ATCCGGTGCG GCTGATCCTG GCCGCCGACG ACCATGCCGT CGCGTTGAGC GTGCGTGACT ACGGGGTCGG TCTGCGTCCC GGAGAGGCCG AGTTGGTGTT CAACCGTTTC TGGCGGGCCG ATCCGTCGCG GAATCGACGG ACCGGGGGCA CGGGCCTGGG CCTGGCGATC AGTCACGAGG ACGCACGACT GCACGGAGGT TGGCTGGAGG CGTGGGGTGA GCCGGGGTGT GGTTCCTGCT TCCGACTCAC GTTGCCGCGT GTCGCGGGCG ACACGTTGCG GCACAGCCCC GTTCCGCTGC CTCCGGACCC GCCTGCCGAG TCGGGCGGGA CCGCCGGTGA GAACCGCGAG GCCACGGCGG TGTTGAGTGC GTCTCAGGAC CGGGACGGCT CCGAGGCCGT CGTCAACGTC GTCGAGCAGG AGGAGACACG GTGA
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Protein sequence | MNGRLASSSR SALSVARRAA AFGRRRMVAL GELWQRSLQF RVTTSTLALS SAVVFVLGVV LQNQIVDRLV ETKERAALEQ LRVAVRTAES QLVGDAGESD SLRKRLSSAI KAITNGSVGT QDTENSSAGA FEPVLVAGDP RRAVEEVIHA GPLEKVPGGL MNYAENNQVA VQYHTEDGST YLIVGAPVTT ATRPIQLYLL FPLNTEQNTV ATVQNTLLVG SAFLVVLLAV ITFMVTRQVV LPVRRAAAAA EDFAEGDLDR RLDVDGEDDL AKLAVSYNEM AASIQRQIRQ LEEFGQLQRR FTSDVSHELR TPLTTVRMAA DVLYASRDEF PPGLSRSSEL LVNELDRFET LLRDLLEISR LDAGVEELSA ESTDVRSIVH SAVEQVRGVL EGNTGSDIVL ELPDEEVTAE VDSRRVERIL RNLLANAVDH GEGHPVRLIL AADDHAVALS VRDYGVGLRP GEAELVFNRF WRADPSRNRR TGGTGLGLAI SHEDARLHGG WLEAWGEPGC GSCFRLTLPR VAGDTLRHSP VPLPPDPPAE SGGTAGENRE ATAVLSASQD RDGSEAVVNV VEQEETR
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