| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_30800 |
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| Symbol | |
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| ID | 8388404 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 3340371 |
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| End bp | 3341975 |
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| Gene Length | 1605 bp |
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| Protein Length | 534 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644977109 |
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| Product | delta-1-pyrroline-5-carboxylate dehydrogenase, group 1 |
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| Protein accession | YP_003134882 |
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| Protein GI | 257057050 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR01236] delta-1-pyrroline-5-carboxylate dehydrogenase, group 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.103979 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCGGCCA ACGAACCGGT TCGCACGTAC GCACCGGGAA CCGCGGAGCG GGAATCCCTG
CAGGCTAGGT TGGCCGAACT CGAAAGTGAG CGGCACGAAC TGCCGCAGAC CATCGGGGGC
CGCCGCCGCA TGGCCGGTGG TGATCCGTTC GATGTCGTGC AACCCCACGA TCACAGGCAC
GTACTCGGCG TGAGTGCACA GGCCACCAAT TCCGACGTGG CCGACGCGGT GGCGGCGGCC
AAGGACGCCG CTCGGGAGTG GGGCGAGCTG CCGTTCGACG AACGGGCGGC GGTGTTCCTC
CGAGCCGCCG ACCTCATCGC CGGCCCCTAC CGCGACACGC TCAACGCGGC GACGATGCTC
GGCCAGTCGA AGTCGGTGCA GCAGGCCGAG ATCGACGCGG CGTGCGAGCT GATCGACTTT
CTGCGGTTCA ACGTGTTCTA CGCGCGGCGC ATCCTGGCCG AACAGCCGAA CTCGGTGCCG
GGCGTGTGGA ACCGGATGGA GTACCGGCCG CTCGACGGCT TCGTCACAGC CATCACGCCG
TTCAACTTCA CGGCCATCGC GGGTAACCTG CCCAGCTCGC CCGCGTTGAT GGGCAACACC
GTGGTGTGGA AGCCGACGCC GTCGCAGCAG TTGGCCGCCC ACTACACCAT GCAGGTGTTC
GAGGAGGCCG GACTGCCCCC AGGCGTGATC AACATGGTGA CCGGTGACGG ACAGGCCGTC
AGCGAGGTCG CTTTGACCGA CCCCGGTTTC GCCGGATTGC ACTTCACCGG TTCGACTGCG
ACGTTCAAGC TGCTGTGGCG CAAGATCGCC GAGAATCTCG ACACCTACGC CTGCTATCCA
CGCATCGTCG GGGAAACCGG CGGTAAGGAC TTCGTGGTGG CGCACCCGTC GGCGAACGTG
GACAAGCTGG TGACCGCATT GGTGCGGGGC GCCTTCGAGT ACCAGGGCCA GAAGTGCTCG
GCGGTCTCCC GGGCGTATGT GCCGGCGTCG CTGTGGAAGT CCGGACTGCG GGAGCAGTTG
GCCGAGGTGA CGAAGACCGT GTCCTACGGC GACGTCACCG ACTTCTCCCA CTTCGGTGGC
GCGGTGATCA ATGCGAAGGC GTTCGCCAAG CACCGTGCCC TGTTGGAGAG CGTGCCCGCG
GACCCGCATC TGGAGATCCT GGTCGGGGGC GGGTGTGACG ACAGCGTGGG GTGGTTCGTG
GAGCCGACGG TGCTCGTCTC GGACGATCCG CACCACGAGG TGTTCTCCAC CGAGTACTTC
GGTCCGATCA TGGCGGTGTA CGTGTACGAG GACGCCGAGT ACGAACGGGT CCTGGAGTCG
GTGGACACCG CGGCGCCGTA CGCGTTGACG GGCGCGGTGT TCGCCGATGA CCGTCGGGCC
ATCGTCCAGG CACACCGGGC GCTGCGGCAC GCGGCGGGCA ACTTCTACAT CAACGACAAG
CCGACCGGGT CGATCGTGGG ACAGCAGCCG TTCGGCGGGG CTCGGGCGTC GGGCACCAAC
GACAAGGCGG GTTCGATGTT CAACCTGTTG CGCTGGACCA GTCCACGCTC CATCAAGGAG
ACCTTCGACG CGCCGACCGA GATCGGCTAT CCCCACATGG GCTGA
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| Protein sequence | MPANEPVRTY APGTAERESL QARLAELESE RHELPQTIGG RRRMAGGDPF DVVQPHDHRH
VLGVSAQATN SDVADAVAAA KDAAREWGEL PFDERAAVFL RAADLIAGPY RDTLNAATML
GQSKSVQQAE IDAACELIDF LRFNVFYARR ILAEQPNSVP GVWNRMEYRP LDGFVTAITP
FNFTAIAGNL PSSPALMGNT VVWKPTPSQQ LAAHYTMQVF EEAGLPPGVI NMVTGDGQAV
SEVALTDPGF AGLHFTGSTA TFKLLWRKIA ENLDTYACYP RIVGETGGKD FVVAHPSANV
DKLVTALVRG AFEYQGQKCS AVSRAYVPAS LWKSGLREQL AEVTKTVSYG DVTDFSHFGG
AVINAKAFAK HRALLESVPA DPHLEILVGG GCDDSVGWFV EPTVLVSDDP HHEVFSTEYF
GPIMAVYVYE DAEYERVLES VDTAAPYALT GAVFADDRRA IVQAHRALRH AAGNFYINDK
PTGSIVGQQP FGGARASGTN DKAGSMFNLL RWTSPRSIKE TFDAPTEIGY PHMG
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