Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_30760 |
Symbol | |
ID | 8388400 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 3336264 |
End bp | 3337070 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644977105 |
Product | hypothetical protein |
Protein accession | YP_003134878 |
Protein GI | 257057046 |
COG category | [S] Function unknown |
COG ID | [COG2135] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0442356 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGATGT GCGGCCGTTA CGCCGCCACC AAGGACACCG CCACGTTGAT GCTGGAGTTC GACGCGGTGG ATGGGACCGA GGGCAAGGCC CCGCAGGCCG ACTACAACGT CGCTCCGACC AAGGACATCG TCACCGTGGT CGAGCGTTTC CCCCGGGACG CCGACGGCAC GGTGTTGGAG GACGAGCCCG CCGTCCGCAG TCTCCGGGTG ATGCGTTGGG GGCTCGTGCC GTTTTGGGCC AAGGACCCGT CGGTCGGCAA CCGCATGATC AACACGAGGG CGGAGACGGC CTCGGAGAAA CCCTCGTTCC GTAACGCGCT CGCTCGTCGG CGGTGCCTCA TCCCCGCCGA CGGATGGTTC GAGTGGAAAG CCGTCGACAG GGGCGTGGGC CGCAGAGTCG CCAAGGAACC GTATTTCATC ACGACCCAGG ACGGATCGTC GCTGGCGCTC GCGGGGTTGT GGGAGACCTG GCGGGATCCG AAGGCCGATC CGGAGGCGCC GCCGTTGATC ACCTGCTCGG TGATCACCAC GCAGGCGGTG GGGCGGCTGG CCGACATCCA CGAACGCATG CCGCTGGCCC TGCCCCGGCA ACGGTGGGCG GATTGGCTCG ACCCCGCTCG CACCGACGTC ACGGATCTGC TCGCCCCACC CGAACCCGGT TGGGTGGACG AGCTGGAGCT GCGTCCGGTG TCCACCGTCG TCAACAACGT GCGCAACAAC GGCCCGGAAC TCATCGAGCC GGTACGGCCC GAGGCCACCG ATCTCGACGA CGCGGCGCTG TTCGACCTGC CTCCGGACCC CCAATGA
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Protein sequence | MPMCGRYAAT KDTATLMLEF DAVDGTEGKA PQADYNVAPT KDIVTVVERF PRDADGTVLE DEPAVRSLRV MRWGLVPFWA KDPSVGNRMI NTRAETASEK PSFRNALARR RCLIPADGWF EWKAVDRGVG RRVAKEPYFI TTQDGSSLAL AGLWETWRDP KADPEAPPLI TCSVITTQAV GRLADIHERM PLALPRQRWA DWLDPARTDV TDLLAPPEPG WVDELELRPV STVVNNVRNN GPELIEPVRP EATDLDDAAL FDLPPDPQ
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