Gene Svir_30760 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_30760 
Symbol 
ID8388400 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3336264 
End bp3337070 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content68% 
IMG OID644977105 
Producthypothetical protein 
Protein accessionYP_003134878 
Protein GI257057046 
COG category[S] Function unknown 
COG ID[COG2135] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0442356 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGATGT GCGGCCGTTA CGCCGCCACC AAGGACACCG CCACGTTGAT GCTGGAGTTC 
GACGCGGTGG ATGGGACCGA GGGCAAGGCC CCGCAGGCCG ACTACAACGT CGCTCCGACC
AAGGACATCG TCACCGTGGT CGAGCGTTTC CCCCGGGACG CCGACGGCAC GGTGTTGGAG
GACGAGCCCG CCGTCCGCAG TCTCCGGGTG ATGCGTTGGG GGCTCGTGCC GTTTTGGGCC
AAGGACCCGT CGGTCGGCAA CCGCATGATC AACACGAGGG CGGAGACGGC CTCGGAGAAA
CCCTCGTTCC GTAACGCGCT CGCTCGTCGG CGGTGCCTCA TCCCCGCCGA CGGATGGTTC
GAGTGGAAAG CCGTCGACAG GGGCGTGGGC CGCAGAGTCG CCAAGGAACC GTATTTCATC
ACGACCCAGG ACGGATCGTC GCTGGCGCTC GCGGGGTTGT GGGAGACCTG GCGGGATCCG
AAGGCCGATC CGGAGGCGCC GCCGTTGATC ACCTGCTCGG TGATCACCAC GCAGGCGGTG
GGGCGGCTGG CCGACATCCA CGAACGCATG CCGCTGGCCC TGCCCCGGCA ACGGTGGGCG
GATTGGCTCG ACCCCGCTCG CACCGACGTC ACGGATCTGC TCGCCCCACC CGAACCCGGT
TGGGTGGACG AGCTGGAGCT GCGTCCGGTG TCCACCGTCG TCAACAACGT GCGCAACAAC
GGCCCGGAAC TCATCGAGCC GGTACGGCCC GAGGCCACCG ATCTCGACGA CGCGGCGCTG
TTCGACCTGC CTCCGGACCC CCAATGA
 
Protein sequence
MPMCGRYAAT KDTATLMLEF DAVDGTEGKA PQADYNVAPT KDIVTVVERF PRDADGTVLE 
DEPAVRSLRV MRWGLVPFWA KDPSVGNRMI NTRAETASEK PSFRNALARR RCLIPADGWF
EWKAVDRGVG RRVAKEPYFI TTQDGSSLAL AGLWETWRDP KADPEAPPLI TCSVITTQAV
GRLADIHERM PLALPRQRWA DWLDPARTDV TDLLAPPEPG WVDELELRPV STVVNNVRNN
GPELIEPVRP EATDLDDAAL FDLPPDPQ