| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_30220 |
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| Symbol | |
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| ID | 8388346 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 3271546 |
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| End bp | 3272928 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644977051 |
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| Product | FAD/FMN-dependent dehydrogenase |
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| Protein accession | YP_003134824 |
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| Protein GI | 257056992 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
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| TIGRFAM ID | [TIGR00387] glycolate oxidase, subunit GlcD |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCGACG TAGCGCAGCG GCTGGCCGAC ATCGTCGGCA CGGACAACAT GGCAAGCGGC
GACGCCGTCG GTGACGACTA CACGGGCGAC GAGGCGCTCG TCGGCGAGCG GATCAAGCCC
AGGTACGTGG TCAAGCCCGC CACCGCCGAG GAGGTCGCCG CCATCCTACG GCTGGCCACC
GAGGAACGCA TACCCGTGAC GGCTCGGGGA TCGGGCACCG GCCTTTCGGG TGCGGTCCGA
CCGCACCCCG ACGGAATGGT CGTCTCCTTC GAGCGGATGA ACGCGATCCT CGACATCGAC
ACCACCAACC ACGTCGCCGT CGTACAGCCG GGCGTGACAC TGTCCGAACT GGATGCCAAG
ACCGCGGAGG TCGGCCTCGG TTACACCGTC TACCCCGGGG AGATGAGCGC CAGCGTCGGC
GGCAACGTCG GCACCAACGC GGGCGGCATG CGAGCGGTCA AGTACGGCGT CACCAGAAAC
AACATCCTCG GCCTGCAAGC CGCGCTCCCC ACCGGCGAAC TGATCCGCAC CGGTGGCCGA
ACGGTGAAGA CCTCGACCGG CTACGACCTC ACCCAGCTGG TCATCGGCTC CGAGGGCACC
CTCGCGCTCG CCACCGAGAT CATCGTCAAA CTGCACCCCC GACTCCCCCA CAACACGACG
GTGCTCGCAC CGTTTCCCAC GCTCAACGCG GTGATGCACG CCGTGCCCCG CATCGTCTCC
AGCGGACTCG CACCGCACAT CCTCGAATAC ATCGACGCGC TGACCATGGC GGCCATCACC
CACACCGCGG AACTGTCCCT CGGCATCCCC GACGACGTCC GGGAGGCATC GCAGGCCTAC
CTGGTGGTGG GACTGGAAAA CCGTGACGCC GACCGCCTCG ACGGCGACGT GGCCGTCCTC
GGTGACCTCC TCACCGACCT CGGTGCCTCC GACGCCTACG TGCTCGAAGG CACCTCCGCA
CGCAAACTGA TCGAAGCGCG GGAGAAGGCT TTCTGGACGG CCAAGGCCGC GGGCGCAGAC
GAGATCATCG ACGTCGTTGT GCCACGTTCG GCCCTGCCCG ACTTTCTCAC CGAAGCGCAA
GCCGCCGCCG CACGCACCGA GTCGGGTGTG GTCGGCTGTG GGCACGCGGG CGACGGCAAT
GTCCACCTCG CCGTGTTCCA GAAGGATGAG GGTAAACGGG ACCGTTTACT GCACGAGATC
TTCGCCGCGG CGATGGAATT GGGTGGTGCC ATCTCCGGTG AACACGGCAT CGGACATGCC
AAGAAGACAC ACTTCCTCCG TCTGGAGGAC CCCGCCAAGA TCGAGTTGAT GAGCCGAGTG
AAGCGGGCAT TCGACCCTGC CGGGATCTTG AACCCCGGTG TGCTCTTCGG CCGGGAGGAC
TGA
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| Protein sequence | MGDVAQRLAD IVGTDNMASG DAVGDDYTGD EALVGERIKP RYVVKPATAE EVAAILRLAT
EERIPVTARG SGTGLSGAVR PHPDGMVVSF ERMNAILDID TTNHVAVVQP GVTLSELDAK
TAEVGLGYTV YPGEMSASVG GNVGTNAGGM RAVKYGVTRN NILGLQAALP TGELIRTGGR
TVKTSTGYDL TQLVIGSEGT LALATEIIVK LHPRLPHNTT VLAPFPTLNA VMHAVPRIVS
SGLAPHILEY IDALTMAAIT HTAELSLGIP DDVREASQAY LVVGLENRDA DRLDGDVAVL
GDLLTDLGAS DAYVLEGTSA RKLIEAREKA FWTAKAAGAD EIIDVVVPRS ALPDFLTEAQ
AAAARTESGV VGCGHAGDGN VHLAVFQKDE GKRDRLLHEI FAAAMELGGA ISGEHGIGHA
KKTHFLRLED PAKIELMSRV KRAFDPAGIL NPGVLFGRED
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