Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_30170 |
Symbol | |
ID | 8388341 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 3266185 |
End bp | 3267276 |
Gene Length | 1092 bp |
Protein Length | 363 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644977046 |
Product | tartrate dehydrogenase |
Protein accession | YP_003134819 |
Protein GI | 257056987 |
COG category | [C] Energy production and conversion [E] Amino acid transport and metabolism |
COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
TIGRFAM ID | [TIGR02089] tartrate dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAACCCGG GGACGGAGAG GAGCGCCGGG ACCGCCGCAA GAAGCTACGA CATCGCCGCC GTTCCCGGAG ACGGCATCGG CGTGGACGTC ACCGCCGAGG CGGTCAAGGT GCTCGACGCG GCGGCGAGCA GGCACGGCTT CACGCTGCGG TGGACGGAGT TCGACTACAG CTGCGAGCGG TATGCCCGGA CGGGCGCGAT GATGCCGGAC GACGGCGTGG AGACGCTGTC CGGTTTCGAC GCGATCCTGC TGGGCGCGGT CGGGTTCCCG GGGGTGCCCG ACCACGTGTC GCTGTGGGGG CTGTTGATCC CACTGCGACG GGCGTTCTCG CAGTACGTCA ACCTCCGCCC GGTACGGCTG CTGCCCGGTA CGACGTCCGT GCTGGCGGGT CGTCGGGCCG ACGAACTGGA GATGGTGATC GTCCGGGAGA ACTGCGAGGG CGAGTACTCC ACGCTCGGCG GCAGGCACAA CCAGGGCCAG CCCGGTGAGT TCGTGTTGCA GGAAGCCGTC TTCACCCGGG TCGGGGTGGA GCGCATCCTG CGCTATGCGT TCGAACTGGC CCGTACGCGG TCACGGAGGG TCTGCTCGGC GACCAAGTCG AACGGCATCG TCCACACGAT GCCGTTCTGG GACGAGATCT TCGAACTCGT CTCCGCCGAC TACCCGGACG TCGAGGCCGA ACAGTGTCAC ATCGACGCGT TGGTCGCGCG CATGGTGCAG CATCCGGATC GACTGGACGT CATCGTGGCG TCCAATCTGT TCGGCGACAT CCTCAGCGAT CTCGCGGCGG CCATCACCGG TGGGCTCGGT ATGGCCCCTT CGGGGAACAT CAACCCGGAG CGGACACATC CGTCGATGTT CGAGGCCGTG CACGGCAGCG CACCGGACAT CGCGGGCCGG GGCATCGCCA ATCCGGTGGC GCAGATACTC GCCGGGGCGA TGATGCTCGA CCAGTTGGGT GAGGCGGAAG CGGCCCGATC GGTGGAAACC GCGGTCGAAC AGGTCCTCGC CGAGGGACGG GTGGCCACTC CCGACCTCGG TGGGAAAGCG ACCACCGAAC AGCTCGGTTC GGCCATCGCC GCCGCCGTGT GA
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Protein sequence | MNPGTERSAG TAARSYDIAA VPGDGIGVDV TAEAVKVLDA AASRHGFTLR WTEFDYSCER YARTGAMMPD DGVETLSGFD AILLGAVGFP GVPDHVSLWG LLIPLRRAFS QYVNLRPVRL LPGTTSVLAG RRADELEMVI VRENCEGEYS TLGGRHNQGQ PGEFVLQEAV FTRVGVERIL RYAFELARTR SRRVCSATKS NGIVHTMPFW DEIFELVSAD YPDVEAEQCH IDALVARMVQ HPDRLDVIVA SNLFGDILSD LAAAITGGLG MAPSGNINPE RTHPSMFEAV HGSAPDIAGR GIANPVAQIL AGAMMLDQLG EAEAARSVET AVEQVLAEGR VATPDLGGKA TTEQLGSAIA AAV
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