Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_30110 |
Symbol | |
ID | 8388335 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 3256910 |
End bp | 3258319 |
Gene Length | 1410 bp |
Protein Length | 469 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644977042 |
Product | putative amidase |
Protein accession | YP_003134815 |
Protein GI | 257056983 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.00374017 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGAGCA CGCCGCCCAT GCTGACCGCG AGCGAACTCG TCGCCGCCTA CTCCGCGGGC GAGTTGTCGC CGGTCGAGGC CACCCGCGCC GCGCTCGACG CCATCGACGA GTACGACCCG GAGTACCACG CCTTCACCCT CGTCGACCCG GAATCGGCAT TGGCCGCGGC CCGGGGTTCG GAGGAACGGT GGCGCGAAGG GAACCCGATC GGCTGGCTCG ACGGTGTTCC GGCGTTGGTG AAGGACATGT TCCTCACCCG GGGTTGGCCC ACGTTGCGCG GATCGCTGTG CATCGACCGC GACCGGCCGT GGGAGGTCGA CAGCCCCATC ACCGCGCGAA TGCGGGAACA CGGCCTGGTA CTGCTCGGCA AGACCACCAC CCCCGAACTG GGGTGGAAGG CCGTGACCGA CAGTCCGCTC GACGGCGTCA CCCGCAACCC CTGGGACCCG GCCCTCACCT CCGGTGGGTC GAGCGGCGGC AGCGCGGTCG CCGTGGCCAC CGGGATGGGC GAGTTGTCCG TGGGCACCGA CGGCGGTGGG TCCGTGCGTA TCCCGGCCTC GTTCTGCGGC ATCGTCGGCT TCAAACCCAC GGGCGGACGC ATTCCGCTGT ACCCGGCCAG TCCGTTCGGC GCTCTGGCCC ACGCGGGGCC GATGGCCCGC TCGGTCGACG ACGTGGCGCT GCTGTTGGAC GTGCTCGCCA TGCCGGACCA CCGTGACCCC TCCTCGCTGC CGCTGTCGTC CGGCACCTAC CGCGAAGCCG TGCGTCGTGA CGTCCGCGGG CTTCGGGCCG CCTATTCCCC CGCTCTCGGC TACCTCGACG TCGATCCGGA GATCACCCAA CTCGTGGCGT CGGTGGTGGC TGTGCTCGGT GAGGCGGGGT TGACCGTGGA GGAGGCCGAT CCCGGGTTCA CCGACCCGAT CGAGGCGTTC GGGGTGCTGT GGTCCACGGG AGCGGCGAAG TGGCTCGACT CGTTCCCGGA GGGTTCGGGA CACCGGGTCG ACCCCGGACT GCGCAGGGTA TGGGAACGGG GACGCACCTA CTCGGCCCGG GACTACCTCG ACGCCACCGC CGAACGCATG GCGTTGGGCA TCCACATGGG AGAGTTCCAC ACCCACTACG ACGTGCTGCT CACCCCGACC ATGCCGGTGC AGCCGTTCGA GGTGGGGCAT GACGTGCCGC CCGGCAGCGG TTTGACCGAC TGGCCGCAGT GGACCGGGTT CACCTATCCG TTCAACATGA CGCAGCAGCC CGCTGTCAGC GTGCCCGCCG GGTTCACGTC GCAGGGGCTG CCCGTGGGGT TGCAGATCGT GGGGCCGCGC CATTCCGACG ACCTCGTGTT GGCGGTGGCC CGGTTGGTGG AGGAGCTCCG CCCCTGGCCG ACCGGGCGAC CGACCAGGAG CCGTGACTGA
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Protein sequence | MSSTPPMLTA SELVAAYSAG ELSPVEATRA ALDAIDEYDP EYHAFTLVDP ESALAAARGS EERWREGNPI GWLDGVPALV KDMFLTRGWP TLRGSLCIDR DRPWEVDSPI TARMREHGLV LLGKTTTPEL GWKAVTDSPL DGVTRNPWDP ALTSGGSSGG SAVAVATGMG ELSVGTDGGG SVRIPASFCG IVGFKPTGGR IPLYPASPFG ALAHAGPMAR SVDDVALLLD VLAMPDHRDP SSLPLSSGTY REAVRRDVRG LRAAYSPALG YLDVDPEITQ LVASVVAVLG EAGLTVEEAD PGFTDPIEAF GVLWSTGAAK WLDSFPEGSG HRVDPGLRRV WERGRTYSAR DYLDATAERM ALGIHMGEFH THYDVLLTPT MPVQPFEVGH DVPPGSGLTD WPQWTGFTYP FNMTQQPAVS VPAGFTSQGL PVGLQIVGPR HSDDLVLAVA RLVEELRPWP TGRPTRSRD
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