Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_29980 |
Symbol | argS |
ID | 8388322 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 3241627 |
End bp | 3243282 |
Gene Length | 1656 bp |
Protein Length | 551 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644977029 |
Product | arginyl-tRNA synthetase |
Protein accession | YP_003134803 |
Protein GI | 257056971 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0018] Arginyl-tRNA synthetase |
TIGRFAM ID | [TIGR00456] arginyl-tRNA synthetase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.661681 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.169962 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGACTCCCG CCGCTCTTGC CGATCTTGTT CGCTCGTCCG CCGTCCAGAT CTTCACCGAC CGTGGGCTGG ATCTCAGCAT CTTGCCCGAA CAGGTGACGG TTGAGCGACC CCGCAACCCC GAGCACGGCG ACTACGCGAC CAATCTCGCG CTTCAGGTGG CGAAGAAGGC AGGGTTACAG CCGCGCGAGT TCGCGGAGGC GCTGGCCGAG GTGATCTCCT CCGCCCCGGG GATCGCGTCC GCCGAAGTCG CGGGACCGGG CTTTCTGAAC CTGCGGCTGG CCGCCGACGC GCAGGGCGAG ATCGTGCGCC AGGTGCTCGA CGCGGGCGCG GACTACGGCC GTGGTGACTC CCTGGTCGGG CAGAAGATCA ACTTGGAGTT CGTCTCGGCC AACCCCACCG GCCCGATCCA CCTCGGTGGC ACGCGCTGGG CCGCGGTCGG TGACGCGTTG GGCAGGTTGC TCGCCGCGCA GGGCGCCGAG GTGACCCGGG AGTACTACAT CAACGACGCC GGGGCCCAGA TCGACCGGTT CGCCGAGTCC CTCCTCGCCG CCGCCGAGGG CAGGCCCACG CCCGAGGACG GGTACGCGGG CGCCTACATC ACCGACATCG CCGCCGAGAT CCTGCGTCGC GAGCCGGAGG TGCTCTCCCT ACCCGATGAG GAGCGGTTCG CGACGTTCAA GCGGCTCGGC GTCGAGCTGA TGCTCGAGGA GATCAAGCAA AGCCTGAGTG ACTTCGGCAC CCACTTCGAC GTCTGGTTCT CCGAGAAGTC GCTGCACACC TCCGGTGAGC TGGAGTCGAT CCTGGCCGAC CTCAAGGAAT CGGGCAGCCT GTACCAGAAG GACGGCGCGT GGTGGTTGCG TTCGACCGAG CACGGTGACG ACAAGGACCG CGTCGTGATC AAGTCGGACG GCACACTCGC CTACATCGCC GGCGACGTGG CCTACCTGCG CAACAAGCTC GACCGCGGGT TCGACCTGTG CGTCTACATG CTGGGTGCCG ACCACCACGG TTACATCGCC CGGCTGAAGG CCGCGGCGGC CGCGATGGGA CACAGCCCCG ACACCGTCGA GGTGCTGATC GGCCAGCTGG TCAACCTCGT CAGCGGTGGT AAGCCGGTGC GGATGAGCAA GCGCGCGGGC ACCGTCGTCA CGATGGAGGA CCTCGTGGAG GCCGTGGGCG TCGACGCCGC GCGCTACGAG TTGTGCCGTT ACTCTGTGGA CGCTTCCCTG GACATCGACC TGGACCTGTT GCGTAAGCGC ACCAACGAGA ACCCGGTGTT CTACGTGCAG TACGCGCATG CCAGGTTGGC GTCCCTGCAA CGCAACGCGG CCGAGCTGAA CCTCGAACCG CGCTCCGATG CGGACGTCAG CCTGTTGACC CATCCGAGGG AGGGCGACCT GATCCGCACG ATCGGGGAGT TCCCCTCGGT GTTGAGGACG GCGGCCGAGT TGCGTGAACC GCACCGTGTC GCCCGTTACC TGGAATCGCT CGCGTCGGCC TATCACAAGT TCTACGACGT CGCGCGTGTC CTGCCGCAGG GCGACGAGGA GCCGACCCCG CTCACGTATG CCCGGCTCGC CCTGTGCGAG GCGACCCGTC AGGTGCTCGC CAACGGGTTG TCCCTGCTCG GAGTGTCCGC GCCGGAACGG ATGTAG
|
Protein sequence | MTPAALADLV RSSAVQIFTD RGLDLSILPE QVTVERPRNP EHGDYATNLA LQVAKKAGLQ PREFAEALAE VISSAPGIAS AEVAGPGFLN LRLAADAQGE IVRQVLDAGA DYGRGDSLVG QKINLEFVSA NPTGPIHLGG TRWAAVGDAL GRLLAAQGAE VTREYYINDA GAQIDRFAES LLAAAEGRPT PEDGYAGAYI TDIAAEILRR EPEVLSLPDE ERFATFKRLG VELMLEEIKQ SLSDFGTHFD VWFSEKSLHT SGELESILAD LKESGSLYQK DGAWWLRSTE HGDDKDRVVI KSDGTLAYIA GDVAYLRNKL DRGFDLCVYM LGADHHGYIA RLKAAAAAMG HSPDTVEVLI GQLVNLVSGG KPVRMSKRAG TVVTMEDLVE AVGVDAARYE LCRYSVDASL DIDLDLLRKR TNENPVFYVQ YAHARLASLQ RNAAELNLEP RSDADVSLLT HPREGDLIRT IGEFPSVLRT AAELREPHRV ARYLESLASA YHKFYDVARV LPQGDEEPTP LTYARLALCE ATRQVLANGL SLLGVSAPER M
|
| |