| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_29940 |
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| Symbol | |
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| ID | 8388318 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 3236435 |
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| End bp | 3237310 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644977025 |
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| Product | homoserine kinase |
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| Protein accession | YP_003134799 |
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| Protein GI | 257056967 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0083] Homoserine kinase |
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| TIGRFAM ID | [TIGR00191] homoserine kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.197382 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGTACA CGATCACCGT CCCGGCGTCG ACGGCGAACG TCGGCTCCGG ATTCGATACG
TTCGGCATGG CGTTGGGGTT GCACGACGTC ATCGACGTGA CCGTGACCGA GTCCGGCCTA
CACGTCGAGG TGATCGATGC CGGAGCCGGT GACATGTCGG CCGTGCCCAC GGACGAGTCG
CATCTGGTGG TGCGTGCGTT GCGGCATGCC TGCCGGTATC TCGACGTCAA GGTGCCCGGC
CTCGCCCTAC GCTGTCGTAA CGCCATTCCG CATTCGCGGG GGCTCGGGTC CTCGGCGGCC
GCGGTCGTCG CCGGGGTCGC GGCCGGATAT GCGTTGGCGG GTAAGGACAT CGACGATGCC
GCGTTGCAGC TCGCGGCGGA GTTCGAAGGG CACGCGGACA ACGCCGCGGC CAGTCTGCTC
GGAGGTTTCG TGGTGGCGTG GCAGTCGGGT TCCACGTTCC GGGCCCAGCG GCTGCGTCCC
CACCCCGCGA TCCGGCCGGT GGTGGCCGTA CCGAAGGAGC GGTCGTCGAC CGCGGAGGCG
CGGGGTCTGC TGCCCGAGCA CGTCCCGCAC GTGGACGCGG CGTTCGCGGC GAGTCGGAGC
GCGCTCATGG TGCACGCGAT CACGTCTCGG CCGGACCTGC TGTTCGAGGC GACGGAGGAT
CGACTGCACC AGGATTACCG TGAATCCGTG TTCCCCGCGT CGGCGTGGTT GATGCGTGTG
TTGCGGGCAC GCGGGGTGGC CGCGGTGATC TCGGGCGCGG GGCCGACGGT GTTGGCGTTG
ACGACGACGG GAATACTCCC GGAGGGAGTG GACGTTACAG GGTTCGAAGT CACCGAGTTA
CCCGTCGATT TCACCGGCGT TCGGGTAAGT GTGTGA
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| Protein sequence | MKYTITVPAS TANVGSGFDT FGMALGLHDV IDVTVTESGL HVEVIDAGAG DMSAVPTDES
HLVVRALRHA CRYLDVKVPG LALRCRNAIP HSRGLGSSAA AVVAGVAAGY ALAGKDIDDA
ALQLAAEFEG HADNAAASLL GGFVVAWQSG STFRAQRLRP HPAIRPVVAV PKERSSTAEA
RGLLPEHVPH VDAAFAASRS ALMVHAITSR PDLLFEATED RLHQDYRESV FPASAWLMRV
LRARGVAAVI SGAGPTVLAL TTTGILPEGV DVTGFEVTEL PVDFTGVRVS V
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