Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_29640 |
Symbol | |
ID | 8388288 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 3202537 |
End bp | 3203187 |
Gene Length | 651 bp |
Protein Length | 216 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644976995 |
Product | translation factor SUA5 |
Protein accession | YP_003134769 |
Protein GI | 257056937 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0009] Putative translation factor (SUA5) |
TIGRFAM ID | [TIGR00057] Sua5/YciO/YrdC/YwlC family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCGG TGTACGACTG CAGTGATCCG CACGCCAGAG CCGACGGGCT GAAGGCGGCC ATCTCGGCGG TGCGATCGGG CAGGCTTGTG GTCCTGCCGA CCGACACCGT TTACGGGATC GGTGCCGACG CCTTCGACGC GACGGCCGTG CGGGCTCTGC TCCAGGCCAA GAACCGGGGT CCCGACATGC CGGTCGGGGT CCTCGTCGGC TCCTGGTCCA CCGTGGACGG GTTGGTGCTG GGACTGTCCC AGGAGGCCAG GACCCTCATC GAGGCGTTCT GGCCCGGCGA TCTTTCGATC GTCGTCTCGC ACGCACCGAG TCTGCACTGG AACCTCGGTA CCACGCGCGG CACGGTGATG CTGCGTATGC CGCTGCACCC GGTGGCGCTC GAAGTACTGC GTGAGGTCGG TCCCATGGCC GTGTCCAGTG CGAACGTCTC CGGGCAGCCC CCGGCCTCCA CGATGCAGGA GGCGAAGGAA CAGCTCGGGG AGTCCGTCGC GGTGTATCTC GACGGCGGCC CCAGTGGCGA TCCCGTGCCT TCCACGATCG TGGACCTCAC GGGGGAGAAA CCGTCCCTGT TGCGTGAGGG CGCCGTCAGC GCCGAGGCTG TGTCGGAGGC GCTCGGTATG GAGATCGGCC GGGCACAGTG A
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Protein sequence | MSAVYDCSDP HARADGLKAA ISAVRSGRLV VLPTDTVYGI GADAFDATAV RALLQAKNRG PDMPVGVLVG SWSTVDGLVL GLSQEARTLI EAFWPGDLSI VVSHAPSLHW NLGTTRGTVM LRMPLHPVAL EVLREVGPMA VSSANVSGQP PASTMQEAKE QLGESVAVYL DGGPSGDPVP STIVDLTGEK PSLLREGAVS AEAVSEALGM EIGRAQ
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