| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_29540 |
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| Symbol | atpC |
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| ID | 8388278 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 3193321 |
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| End bp | 3193701 |
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| Gene Length | 381 bp |
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| Protein Length | 126 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644976985 |
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| Product | F0F1 ATP synthase subunit epsilon |
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| Protein accession | YP_003134759 |
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| Protein GI | 257056927 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0355] F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) |
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| TIGRFAM ID | [TIGR01216] ATP synthase, F1 epsilon subunit (delta in mitochondria) |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.497056 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGGAGA GCTACGTGGC TGAGATGTCC GTCGAGCTGG TGGCTGTCGA ACGCCGCCTG
TGGTCGGGTA AGGCGCAGTT CGTCGCCGCG CAGACCACCG AGGGCGAGAT CGGAATTCTG
CCCGGTCACG AGCCCGTGCT CGGCCAGCTC GTCGAGGGCG GCATCGTGAA GGTGACGACC
ACGGACGGGC ACACGGTGAC CGCGGCCGTG CACGGCGGGT TCCTGTCGGT CACGGGCGAT
AGCGTCAGCG TTCTCGCCGA GTCCGCCGAG TTGGGCGACG AGATCGACGT GGAGCAGGCG
CGGCGCGCGT TGGCCGACGA GGACGCGACC GAACGCGCGA GGGCTGCTGC CAGGCTTCGG
GCGGCTGGTC AAACGGTCTG A
|
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| Protein sequence | MKESYVAEMS VELVAVERRL WSGKAQFVAA QTTEGEIGIL PGHEPVLGQL VEGGIVKVTT
TDGHTVTAAV HGGFLSVTGD SVSVLAESAE LGDEIDVEQA RRALADEDAT ERARAAARLR
AAGQTV
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