Gene Svir_29520 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_29520 
Symbol 
ID8388276 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3192202 
End bp3192774 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content67% 
IMG OID644976983 
ProductATP:cob(I)alamin adenosyltransferase 
Protein accessionYP_003134757 
Protein GI257056925 
COG category[S] Function unknown 
COG ID[COG2096] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00636] ATP:cob(I)alamin adenosyltransferase 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.52712 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGTAC GGATCAACCG TGTCTACACC AGAGTCGGGG ACAGCGGCAC CACGGCGCTC 
GGCGACGGCA CCCGTGTCCC GAAGACCGAC CCACGTCTAG GCGCGTACGC GGACGTCGAC
GAAACCAATT CGGTCATCGG TGTCGCCCTC GCGCTCGGTT CACTGCCCGA CGACATCAGC
CGAGTGCTCA GGCGCGTGCA GAACGACCTG TTCGACGTCG GCGCCGATCT GAGCACGCCC
GTGATCGACG ACCCGCCGTA CCCCCCGCTG CGGATCACGC AGGACTACAT CGACCGCCTC
GAGGACTGGT GCGACGAATT CAACGAACGG GTGGGCAAGC TGACGTCGTT CATCCTCCCC
GGCGGTTCAC CCGGCGCAGC GCTGCTGCAC CAAGCACGCA CGGTGGCACG CAGGGCCGAG
CGGTCGGCGT GGGCACTGGT CGAGGCGGAC CCGGACGGCA CCAACACTCT CGCGGTCACC
TATCTCAACC GACTGTCCGA CCTGCTGTTC ATCCTCGCCA GAGTCGCCAA TCCGGACGGT
GACGTGTTGT GGAAGCCGGG AGGCGAACGC TGA
 
Protein sequence
MPVRINRVYT RVGDSGTTAL GDGTRVPKTD PRLGAYADVD ETNSVIGVAL ALGSLPDDIS 
RVLRRVQNDL FDVGADLSTP VIDDPPYPPL RITQDYIDRL EDWCDEFNER VGKLTSFILP
GGSPGAALLH QARTVARRAE RSAWALVEAD PDGTNTLAVT YLNRLSDLLF ILARVANPDG
DVLWKPGGER