| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_29490 |
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| Symbol | |
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| ID | 8388273 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 3188784 |
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| End bp | 3189578 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644976980 |
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| Product | ectoine/hydroxyectoine ABC transporter solute-binding protein |
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| Protein accession | YP_003134754 |
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| Protein GI | 257056922 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | [TIGR02995] ectoine/hydroxyectoine ABC transporter solute-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.203368 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTGGTC AGGGCGGCGG AAACACACTC CAGCGAATAC GTGACGCCGG CACCGTGAAA
GTAGGCATCG CCGGGGAGAT CCCCTACGGA TTCACGCAGG GCGGTGAGGT GACGGGTGAG
TCACCCGAGG TCGCGAAGGC GGTCTTCAAG GCGCTCGGCG TCGAGAACGT CGAGGCCACC
CAAGTCGAGT TCGATCAGCT GATCCCCGCG CTCCAGGCGG GTCAGTACGA CATGGTCGCC
GCGGGCATGG CGATCATTCC CAAACGGTGT GAACAAGCGC AGTTCTCCAC CGTCGACTAC
GTCACCAACA CGGCGTTCCT GGTCCCCCAA GGCAATCCGC AGGACGTGAC GTCGTTCGAG
GACATCAAGG AGAAGGGGCT GGGGCTCGCG GTGCTGTCGG GCACGATCGA ACAACAAGTG
GCCCAAGCCT TGAACGTCGG CGAGATCCAG ACCTACGGCG GACAGTCCGA GATGCTGCAG
GCGTTGCAGG CGGGCAGAGC CTACGCCGGT GCGCTCACCG ACATCTCGTT GCGCGCGTTG
TTGGACCAGA ATCCGGGGGT CAAGTTCGAG GTCACCGAAG GTTTCGTACC CGTGGTGGAC
GGTAAGGAGC AGATCCAGGC GGGCGGCTTC GTGTTCCGCA AGGGTGAGAC CGAGCTGGTG
AACGCCTTCA ACGAGGAGCT CACCAAGCTG CACGACAGCG GCCAATGGCT GGAGATCGTC
GAGCCGTTCG GATTCACGGA AGACAACCTG CCGCCGAAGG ACGTCACCAC CGAACAGTTG
TGTTCCGGCG AGTGA
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| Protein sequence | MGGQGGGNTL QRIRDAGTVK VGIAGEIPYG FTQGGEVTGE SPEVAKAVFK ALGVENVEAT
QVEFDQLIPA LQAGQYDMVA AGMAIIPKRC EQAQFSTVDY VTNTAFLVPQ GNPQDVTSFE
DIKEKGLGLA VLSGTIEQQV AQALNVGEIQ TYGGQSEMLQ ALQAGRAYAG ALTDISLRAL
LDQNPGVKFE VTEGFVPVVD GKEQIQAGGF VFRKGETELV NAFNEELTKL HDSGQWLEIV
EPFGFTEDNL PPKDVTTEQL CSGE
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