| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_28900 |
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| Symbol | |
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| ID | 8388214 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 3140641 |
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| End bp | 3142209 |
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| Gene Length | 1569 bp |
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| Protein Length | 522 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644976921 |
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| Product | cell envelope-related function transcriptional attenuator common domain protein |
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| Protein accession | YP_003134696 |
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| Protein GI | 257056864 |
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| COG category | [K] Transcription |
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| COG ID | [COG1316] Transcriptional regulator |
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| TIGRFAM ID | [TIGR00350] cell envelope-related function transcriptional attenuator common domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.385343 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGACGTC GTCCCACGAG CACGCGTGGG GATCACCGGG GACGTCGGGC CGGGCGACCG
GACGGAAGCT CCGTCAGGGC GGTTCCCGCT TCGGAGCAGA AGCGCAGCAA GGGCGGGACC
GGGGCCCGGA TCGTCCTGGC CATGGTCTCC GTGCTGGTGT TGACCATCAC CGGCTACGCC
TGGGCGGCCA TGAAAGGTTT GGTGGACGGC CTCACGATGG CGGACGTCAT CGGGGAGGAC
ACGGGTGAGC TACCGGCGGA CGGGGCGCGT GACATCCTCC TCGTCGGCAT GGACAGCCGG
GTCGACGCAC AGGGCAACCC GCTGCCGCAG GACATGCTGG CCAAACTGAA CGCCGGTGTC
GCCGACGGCG AGCTCAACAC CGACACGTTG ATCCTGGTGC ACATCCCCAA CGACGGCCGC
AAGGCGGTGG CGTTGTCACT GCCGAGGGAT TCGTACGTCA ACATCCCCGG CTTCGGCCAA
CACAAGATCA ACTCAGCGTA TGCGCGGGGT AAGGCCGCCG CGAAGGAACG GTTACGCCAG
GAAGGCGTCA CCGACGAGCA GGAACTCGAG GTCCGTAGCA ACCAGGAGGG CGCCAAGACC
CTCATCGCGA CGGTCGAAGC GCTCACGGGA CAGACCGTCG ACAACTACGC CTCGATCAAC
TTGTTGGGGT TCTACGAGAT CACCAACGCC GTCGGCGGTG TCGAGGTGTG CCTGAACCAG
GCGACCCGTG ACCCGTATTC GGGCGCGAAC TTCAAGGCCG GCAGGCAGTC GATCTCCGGA
GTGGACGCGT TGGCGTTCGT GCGACAACGA CACGGACTGC TACGCGGAGA CCTCGACCGA
GTCGTACGCC AGCAGGTGTT CCTGGCCGGA TTGGCCAACA AGGTGTTGTC GGCGGGCACG
CTCACGGACC CGGGGAAGTT GGAGCGACTG ACCGAGGCCA TCAAGAAATC GGTCGTGGTG
AACAAGGGCT GGGACATCCT GTCGTTCGCC CAACAGATGA AGGATTTCAC CGGTGGCCAG
ATCGAGTTCC ACACCATCCC GATCGAGAAT CCGGAATTCG AGACTCCGGA CGGACTCGCC
ATCAAGATCA ACCCCAGTGA GGTGCGGAAT TTCGTGGCGA AGCTCTCCGG CAGGAAAGCC
GAGGCGTCAC CGACCCCCGC CCCCGAGGAG ATCACCGTCG ACATCTACAA CACGTCGAAC
ATCCAAGGCC TGGCCAGCAG TGTCTCGGAG GCACTGGTCG CACAGGGTTT CACGCAGGGC
GAGGTGGCCA ACGACACGCC GCGACAAAGC AGTGTGGTGC AGTCCGCCTC CGGTGAGCGG
TCCTCCGCGG AGGCGGTGGC CGCGGCGTTG GGTAGGGAGA TCGCCGTGGA GGAGAACCCG
GACGTCAGTC CCGGCCACGT ACGCGTTCTG CTCGCCCCCG ACTATCAGCA AAACGGTAAC
TCCACGCCGG GCGCTCCCGC CGGAGGCGGC AACACACCCG GGACCTCGGT GACGGGAGCC
CCTCGACAAG CCGGTGAGGA GGCGGCCGAA CAACCGATCA CAGCCGATGG TGTGACGTGT
GTGAACTGA
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| Protein sequence | MRRRPTSTRG DHRGRRAGRP DGSSVRAVPA SEQKRSKGGT GARIVLAMVS VLVLTITGYA
WAAMKGLVDG LTMADVIGED TGELPADGAR DILLVGMDSR VDAQGNPLPQ DMLAKLNAGV
ADGELNTDTL ILVHIPNDGR KAVALSLPRD SYVNIPGFGQ HKINSAYARG KAAAKERLRQ
EGVTDEQELE VRSNQEGAKT LIATVEALTG QTVDNYASIN LLGFYEITNA VGGVEVCLNQ
ATRDPYSGAN FKAGRQSISG VDALAFVRQR HGLLRGDLDR VVRQQVFLAG LANKVLSAGT
LTDPGKLERL TEAIKKSVVV NKGWDILSFA QQMKDFTGGQ IEFHTIPIEN PEFETPDGLA
IKINPSEVRN FVAKLSGRKA EASPTPAPEE ITVDIYNTSN IQGLASSVSE ALVAQGFTQG
EVANDTPRQS SVVQSASGER SSAEAVAAAL GREIAVEENP DVSPGHVRVL LAPDYQQNGN
STPGAPAGGG NTPGTSVTGA PRQAGEEAAE QPITADGVTC VN
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