| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_28420 |
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| Symbol | |
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| ID | 8388166 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 3085266 |
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| End bp | 3087665 |
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| Gene Length | 2400 bp |
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| Protein Length | 799 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644976873 |
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| Product | Excinuclease ATPase subunit |
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| Protein accession | YP_003134650 |
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| Protein GI | 257056818 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0178] Excinuclease ATPase subunit |
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| TIGRFAM ID | [TIGR00630] excinuclease ABC, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCAAGG ACTCATCGCC CGCGATACCC GCCGCCGACA GCCACGACAC GATCCGGGTG
CACGGCGCGC GCGTGAACAA CCTCAAAAAC CTCACCGTCG AGATCCCGAA ACGTCGGCTG
ACCGTGTTCA CCGGTGTGTC CGGCTCGGGC AAGAGCTCCC TCGTGTTCGA CACGATCGCC
GCGGAGTCAC AGCGGTTGGT CAACGAGACC TACAGCGCTT TCGTGCAGGG CTTCATGCCG
CATTCGGCGC GGCCCGACGT CGACGTGTTG GACGGGTTGA CGGCCGCGAT CATCGTGGAC
CAGCAGCGGC TGGGCTCCGA CCCCCGGTCC ACGGTCGGCA CCGCGACCGA CACGGGGGCG
ATGCTGCGCA TCCTGTTCAG CCGGCTCGGC CGGCCGCACA TCGGCTCGCC CCAGGCCTTC
TCGTTCAACG TCGCCTCGAT CAGCGGAGCG GGTGCGGTCA CGCTGGAGCG GGGCGGAAGG
AAGGTGAAGG AGCGACGCGG GTTCAGCATC ACCGGCGGCA TGTGTCCGCG CTGTGAGGGG
CTGGGCACGA TCTCCGACAT CGACCTCACC CAGCTCTACG ACGAGTCCAA GTCGATCTCC
GAGGGGGCGT TCACCATCCC CGGCTGGAAG TCGGACAGCT TCTGGACGGT GCGGCTCTAC
GCCGAGTCGG GGTTCGTCGA CCCCGACAAA CCGATCCGGG ACTACACGAA GGAGGAACTC
GACGCCTTCC TGTACAAGGA GCCGACCAAG GTGAGGATCG GCGGTGTCAA CCTCACCTAC
GAGGGGCTGA TCCCGAAGTT CCAGAAGTCG TTCCTGTCCA AGGACAAGGA GGCGATGCAG
CCGCACATCC GGGCGTTCGT GGAACGCGCG GTGAAGTTCA CCACCTGTCC GGAGTGCGAC
GGCACCCGGC TGTCCGAGAC GGCCCGCCCG TCGAGGATCG AGGGGATCAA CATCGCCGAC
GCCTGCGCGA TGCAGGTCAG CGACCTGGCC GAATGGGTGC GCGGGCTCCG CGAATCCGGT
GGGAGTCGGG TGCGGGAGAC GACGGCGCCG CTGCTGGCCG CCTTGCAGGA CACGCTCGAC
TCGTTCGTGG AGATCGGGCT CGGATACCTC TCGCTCGACC GACCGTCGGG CACCCTGTCG
GGTGGTGAGG CGCAGCGCGT CAAGATGGTC CGCCACCTCG GTTCTCCGCT GACCGACGTC
ACCTACGTCT TCGACGAGCC GACCACCGGT CTGCACCCTC ATGACATCCA GCGGATGAAC
GAGCTGCTGC TGCGGTTGCG CGACAAGGGG AACACGGTGC TCGTCGTGGA ACACGAGCCG
GAGGTCATCG CGATCGCCGA CCACGTCGTC GACCTCGGCC CGGGAGCGGG TGCCGCGGGC
GGCTCGGTCT GTTTCGAGGG CACCGTCGCG GGGTTGCGGG GCAGCGGTAC CCTCACCGGC
CGCCATCTCG ACGACCGGAC CGCCCTCAAA AAGACCGTGC GGACACCCAC CGGTCGGCTT
CCGGTCCGTG GGGCGAACAC GCACAACCTG CGCGACATCG ACGTCGACAT CCCGCTCGGC
GTGCTGGTCG CCGTCACCGG GGTCGCGGGT TCGGGCAAGA GTTCGTTGGT GCATTCCTCG
CTGCCCGCCG ATGTGGGTGT GGTCGCGGTG GACCAGACAC CGATCCGCGG CTCGCGACGC
AGCAACCCGG CGACCTACAC CGGATTGCTC GACCCGATCC GCAAGGCGTT CGCGAAGGCC
AACGGTGTGA AGCCGGGACT GTTCAGCCCG AACTCCGAAG GCGCCTGCCC CACCTGCAAC
GGCGTCGGTT TCCTCCACAC CGACCTGGGG ATGATGGCCG GGGTGGCCGT CACCTGTGAG
GAATGCGAGG GGAAGCGGTT CCAGCCCTCG GTACTCGAAT ACGAATTCGG GGGACGTGAC
ATCAGCGAGG TGCTCGCGAT GTCGGTGGAC GAGGCCGGGG AGTTCTTCGG CGCCGGTGAA
GCGCGTGTCC CCGCGGCCCA CAGGATCCTT CAACGACTCG TGGACGTGGG ACTCGGCTAT
CTCACCCTCG GCCAACCGCT CACGACACTG TCCGGTGGGG AACGACAGCG GCTCAAACTC
GCGACGCACC CGGGGGAGAG GGGTGGGATC CTCGTCCTGG ACGAACCGAC CGCCGGCTTG
CACCTCGCCG ACGTCGAGCA GTTGCTCGGT CTCCTCGACC GGCTCGTCGA GGAGGGGAAG
TCGGTCATCG TCGTCGAGCA TCACCAGGCC GTCATGGCGC ACGCCGACTG GATCATCGAC
CTCGGTCCCG GAGCCGGCCA CGAGGGAGGT CGGATCGTCT TCGAGGGCAC CCCGAGGGAG
CTCGTCGCCG ATCGGTCCAC ACTCACCGGT GCCCACCTGG CGGCCTACGT CGGCGGTTGA
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| Protein sequence | MTKDSSPAIP AADSHDTIRV HGARVNNLKN LTVEIPKRRL TVFTGVSGSG KSSLVFDTIA
AESQRLVNET YSAFVQGFMP HSARPDVDVL DGLTAAIIVD QQRLGSDPRS TVGTATDTGA
MLRILFSRLG RPHIGSPQAF SFNVASISGA GAVTLERGGR KVKERRGFSI TGGMCPRCEG
LGTISDIDLT QLYDESKSIS EGAFTIPGWK SDSFWTVRLY AESGFVDPDK PIRDYTKEEL
DAFLYKEPTK VRIGGVNLTY EGLIPKFQKS FLSKDKEAMQ PHIRAFVERA VKFTTCPECD
GTRLSETARP SRIEGINIAD ACAMQVSDLA EWVRGLRESG GSRVRETTAP LLAALQDTLD
SFVEIGLGYL SLDRPSGTLS GGEAQRVKMV RHLGSPLTDV TYVFDEPTTG LHPHDIQRMN
ELLLRLRDKG NTVLVVEHEP EVIAIADHVV DLGPGAGAAG GSVCFEGTVA GLRGSGTLTG
RHLDDRTALK KTVRTPTGRL PVRGANTHNL RDIDVDIPLG VLVAVTGVAG SGKSSLVHSS
LPADVGVVAV DQTPIRGSRR SNPATYTGLL DPIRKAFAKA NGVKPGLFSP NSEGACPTCN
GVGFLHTDLG MMAGVAVTCE ECEGKRFQPS VLEYEFGGRD ISEVLAMSVD EAGEFFGAGE
ARVPAAHRIL QRLVDVGLGY LTLGQPLTTL SGGERQRLKL ATHPGERGGI LVLDEPTAGL
HLADVEQLLG LLDRLVEEGK SVIVVEHHQA VMAHADWIID LGPGAGHEGG RIVFEGTPRE
LVADRSTLTG AHLAAYVGG
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