| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_28370 |
|---|
| Symbol | |
|---|
| ID | 8388161 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | + |
|---|
| Start bp | 3079040 |
|---|
| End bp | 3080467 |
|---|
| Gene Length | 1428 bp |
|---|
| Protein Length | 475 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 644976868 |
|---|
| Product | predicted transcriptional regulator |
|---|
| Protein accession | YP_003134645 |
|---|
| Protein GI | 257056813 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3800] Predicted transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCAAGA CTTTCGCCGG AGCGCGACTG CGTCATCTGC GAGAAAGCCG GTCGATGAGC
CAAGCCGAGC TGGCTCGACT GCTCGAAATC TCACCGAGTT ACCTCAACCA GATCGAGCAC
AACACCCGTC CGCTGACCGT TCCGGTACTG CTTCGCATCA CCGAAGCGTT CGGTGTGGAC
GCCGAGTTCT TCGCCAACAA CGACACCTCC CGACTTGTCG CCGACGTCCG AGAGGCACTG
TTGGACGAGT CGGTCAACGC CGACGTCTCC CCCGGGGAGA TCAACGACTT GGCGAAGAAC
CTGCCCTCGG TGGCGCAGGC ACTGGTCAAG TTGCACCGCA ACTACCGCAA CGCCATCGAG
GCCACCGCGG CGCTCGTCAC CGAGGACGGG CGCGGCACCC ACGGCAGCCC CGCGGCACCC
CTCCCCCACG AGGAGGTGCG GGACTTCTTC TACGAGCGCG AGAACTACGT CGCCGAACTC
GACGAACGCG CCGAGAAGAT GTACGAGGAA CTGGGCCTGC GTCGAGACGA GATCCGAAAC
GGACTGCGCG ATCGCCTGGC CGAACACTAC GGCGTCACCG TGACCACCGA GGGACTCAAC
CTCGCCGCGG GCGAACAACA CCGTTACGAA CCCGACGCGA AGGTGCTGCG ACTGGCGCCG
ACACTGCGCA TCGGACAGCA GGCGTTCCGC ATGGCCTCGC AGATCGCGCT GCTGGAGTAC
GACGACCTGA TCACCGAACT GGCCGATTCG TGGGCGTTCT CGGGCCCACC GGCACGCTCG
TTGGCGCGGG TGGGCCTGGC GAACTACTTC GCGGGCGCGC TGATCCTGCC CTACAAGGCG
TTCCTCAGCG CGGCCGAACG GTTCCGCTAC GACATCGAGT TGCTGTGCGA GCACTTCGGT
GTCGGATTCG AGACGGTGTG CCACCGCCTG TCCACGTTGC AACGGCCCAA GATGCGCGGT
ATTCCGTTCT CGTTCGTCCG GGTCGACCGC GCGGGCAACA TGTCGAAGCG CCAATCGGCC
GCCGGGTTCC ACTTCTCCCG CGTGGGCGGT GCTTGTCCGT TGTGGGTCAT CTACGAGGCG
TTCACCCGCC CCGGCAAGAT CCTCCCCCAG GTCGTGACGC TGCCGGACGG CAAAAGCTAC
TTCTGGATCG CGCGCACCGT CTCCCGCAAC ATCGGCGGGT ACGGCAGTCC GGGGAAGATG
TTCTCGGTGG GACTCGGCTG CGAACTACGC CACGCCCACC GACTGGTCTA CTCCGCGGGG
TTGAACCTCG ACGACAAGTC CGCAGCCACC CCCATCGGCA TGGGCTGCAA GGTGTGTGAA
CGTCCCGCCT GCCCCCAACG GGCGTTCCCG ACGATCGGCA AGGAACTGAC AGTGGACGAG
AACACCAGCA CGTTCGTCCC GTATCCCGCG GTACCGAAGA CGGACTGA
|
|---|
| Protein sequence | MSKTFAGARL RHLRESRSMS QAELARLLEI SPSYLNQIEH NTRPLTVPVL LRITEAFGVD
AEFFANNDTS RLVADVREAL LDESVNADVS PGEINDLAKN LPSVAQALVK LHRNYRNAIE
ATAALVTEDG RGTHGSPAAP LPHEEVRDFF YERENYVAEL DERAEKMYEE LGLRRDEIRN
GLRDRLAEHY GVTVTTEGLN LAAGEQHRYE PDAKVLRLAP TLRIGQQAFR MASQIALLEY
DDLITELADS WAFSGPPARS LARVGLANYF AGALILPYKA FLSAAERFRY DIELLCEHFG
VGFETVCHRL STLQRPKMRG IPFSFVRVDR AGNMSKRQSA AGFHFSRVGG ACPLWVIYEA
FTRPGKILPQ VVTLPDGKSY FWIARTVSRN IGGYGSPGKM FSVGLGCELR HAHRLVYSAG
LNLDDKSAAT PIGMGCKVCE RPACPQRAFP TIGKELTVDE NTSTFVPYPA VPKTD
|
|---|
| |