| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_28040 |
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| Symbol | |
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| ID | 8388128 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 3039201 |
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| End bp | 3043784 |
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| Gene Length | 4584 bp |
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| Protein Length | 1527 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644976835 |
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| Product | glutamate synthase (NADH) large subunit |
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| Protein accession | YP_003134612 |
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| Protein GI | 257056780 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0069] Glutamate synthase domain 2 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.723113 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.697076 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACGC AGGGGGTCCC TTTGATCTTC TCCGCGATCC CAGAGAAGCA GGGCGTTTAC
GATCCTGCGG CGGAAAAGGA CGCATGCGGT GTGGCCATGA TTGCCCACGT CAAGGGCGTG
CGTTCGCACG GGATCGTCAC GGACGGTTTG ACCGCGCTCA TGAATCTCGA CCATCGCGGT
GCCGCGGGAG CGGAGCCCAC GAGTGGTGAC GGCGCGGGCA TTCTGGTGCA ACTTCCGGAC
GATTTCCTGC GCGCCGAGGT GGATTTCGCA CTCCCCGAGC CTGACGAACG CGGTCGGCAC
CGCTACGCGG CGGGACTGGT GTTCCTGCCG GCGGAGGCCG AGGCACGGGC ACGGGCCGTG
AGAACGGTGG AACGCATCGC GACCGAGGAG AACCTGGTCG TGCTCGGGTG GCGAGAGGTG
CCCACGGCTC CGGACGCCGC CGAGGTCGGC CCCACCGCCC GGTCGGTGAT GCCGCACTTC
GCCATGCTGT TCGTCGCGGA GGCGCCGAAC GCCGACGGGG ACCGCCGTGC GGGTGTGGAC
CTCGACCGGC TCGCGTTCTG CCTGCGAAAA CGTGCCGAAC ACGAGACCCT CGCCGCCGAG
TGCGGGGTGT ACTTCCCGTC GTTGTCGGCG CGGACCCTGG TCTACAAGGG GATGCTCACG
CCGACCCAGC TTCCGGTGTT CTTCCCCGAC CTGCGCGACG AGCGGTTGAC CAGCGCCATC
GCGCTCGTGC ACAGCCGCTT TTCCACCAAC ACGTTCCCGT CGTGGCCGCT GGCGCATCCC
TTCCGGTTCG TCGCGCACAA CGGCGAGATC AACACCATCC GGGGCAACCG CAACCGGATG
CGGGCGCGCG AGGCGTTGTT GGACTCCGAC CTCATTCCGG GAGACCTCAG TCGGCTCTTC
CCCGTGTGCT CGCCGGACGG CTCCGACTCG GCGTCGTTCG ACGAGGTACT GGAACTGCTG
CACCTCGGAG GGCGGAGTCT GCCGCACGCG GTGCTCATGA TGATCCCCGA GGCGTGGGAG
AACCACCGCA CCATGGACCC CGCGCGCCGG GCGTTCTACC AGTTCCACGC GAGCCTCATG
GAACCGTGGG ACGGCCCCGC GTGCGTGACC TTCACCGACG GGTCGCTGGT CGGCGCGGTG
CTCGACCGCA ACGGACTGCG GCCGGCCCGC TGGTGGCGTA CCGCGGACGA TCGTGTCGTG
TTCGCCAGCG AGAGCGGCGT GCTGGACGTG CCTGCGGGGG AGGTCGTCGC CAAAGGCAGG
CTCAAGCCGG GCCGCATGTT CTGCGTGGAC ACCGAGGCGG GCAGGGTCGT CGACGACGAC
GAGATCAAGG CCGACCTCGC CGCGCAGGCC CCCTACGAGG AGTGGCTGCG CGCGGGACTG
CTGTCCCTCG ACAAGCTCCC CGAGCGGCAG CACGTGCCCC AGAGCCATGC CTCCGTCCTG
CGGAGGCAAC TCACCTTCGG CTACACCGAG GAGGAGCTGA AGGTCCTGCT GGCGCCGATG
GCGCTCAAGG GCGCCGAACC CGTGGGGTCG ATGGGGTCGG ACACGCCTCC CTCGGTGCTC
TCCAAGCGGT CCCGGCTGTT GTACGAGTAC TTCAAGCAGG GGTTCGCGCA GGTCACCAAC
CCGCCGCTCG ACGCCATCCG CGAGGAACTC GTCACCTCCT TAAGCAGGGT GATGGGACCG
GAGCAGAACC TGCTCGCGCC GGGACCCGCC TCGTGCCGGC AGATCCAGCT CGACTCGCCC
GTCATCGACA ACGACGAGCT CGCCAAGCTC ATCCACGTCA ACGCCGACGG CGACCTGCCC
GGATTCTCCT GCACCGTCCT TTCAGGACTG TACGAGGTGG ACGGTGGCGG GGAGGCGCTC
GCCGAGGCGA TCGAGCGGGT GCGGAAGGAG GCGTCGCAAG CCGTGGAGGC CGGTGCCCAC
ATCCTCGTGC TCTCCGACCG CGGCTCCGAC CACCGGATGG CACCGATTCC CTCGCTGTTG
CTCGTGTCGG CGGTGCACCA CCACCTCGTT CGGACCAAGG AGCGCCTGCG GGTCGCGCTC
GTGGTGGAGA CGGGCGACGC GCGCGAGGTA CACCACATCG CGCTGCTGCT CGGGTACGGT
GCCGCGGCGG TCAACCCGTA CCTGGCGTTC GAGTCGATCG AGGACCTCAT CGCGCAGGGA
GCCGTCAGCG GGGTCGACGC CCCCACCGCC GTGCGCAACT ACATCACGGC GCTGAACAAG
GGCGTTTTGA AGATCATGTC GAAGATGGGC ATCTCGACCG TCGGCGCCTA CACCGGAGCC
CAGGTCTTCG AAGCCCTGGG GTTGTCGCAG GACGTCCTCG ACGAGTACTT CACCGGTACC
GTGTCCCCCC TCGGTGGGGT GGGCCTGGAC GTGCTCGCCG AGGAGGTGGC CATCCGGCAC
CGTCGCGCGT ATCCGGAGAA CCCCGCCGAG CGTGCCCACC GTGGTCTGGA GTCGGGTGGT
GACTACGCCT ACCGCCGGGA GGGCGAACTG CACCTGTTCA CCCCCGAGAC CGTGTTCCTG
CTCCAGCACG CGAGCGCCTC GCGACGGTGG GAGGTGTACC GCCGATACGT CGACGAGGTG
AACCGGCTGA ACCGCGAGGG CGGTGTCCTC CGGGGGATGT TCGCCTTCCG GGAAGGCGTG
CGGAAACCCG TGCCGATCGA GGAGGTCGAG TCGGTCGAGT CGATCTGTCG CCGTTTCAAC
ACCGGCGGCA TGTCGTACGG CTCGCTCTCG CTGGAGGCAC ACCAGACGCT CGCCGTCGCC
ATGAACACGA TCGGCGGTCG GTCGAACTCC GGTGAGGGCG GGGAGGAGCC GGACCGGTTG
CACGACCCGT TGCGGCGCAG TGCCGTGAAG CAGGTGGCTA GCGGCCGGTT CGGCGTCACC
AGCGAGTACC TGGTCAGCGC CGATGACATC CAGATCAAGA TGGCGCAGGG CGCCAAGCCG
GGCGAGGGCG GGCAACTGCC GCCGCACAAG GTGTACCCGT GGATCGCGAA GACCCGGCAC
TCGACGCCGG GCGTGGGGCT GATCTCCCCG CCGCCGCACC ACGACATCTA CTCGATCGAG
GACCTGGCCC AGCTCATCCA CGACCTCAAG AACGCCAACG AGCGGGCGCG CATCCACGTC
AAGCTGGTGA GCTCGCTGGG AGTCGGCACG GTGGCCGCGG GGGTGGCCAA GGCGCACGCG
GACGTGGTGC TCATCTCCGG ACACGACGGC GGCACCGGCG CCTCGCCGAT GAACTCCCTC
AAGCACGCGG GCACGCCGTG GGAGATCGGG TTGGCGCAGA CCCAGCAGAC CCTGATGCTG
AACGGCCTGC GCGACCGCAT CACCGTGCAG GTGGACGGCG GTTTCAAGAC CGGCCGTGAC
GTCGTCGTCG CGGCGTTGCT CGGCGCGGAG GAGTACGGCT TCGCCACCGC GCCGCTGGTG
GTGGCGGGAT GCGTGATGAT GCGCGTGTGT CACCTGGACA CGTGTCCGGT GGGGGTCGCG
ACCCAGAACC CCGCCCTCCG CGAGCGCTTC ACCGGCCGGG CCGAGCACAT CGTGAACTTC
TTCAGGTTCG TGGCGCAGGA GGTACGGGAG TACCTCGCGC GGCTCGGCTT CCGCTCACTC
GACGAGGTCA TCGGCCGGGC CGATCTGCTC GACGTCGACG AGGCGGTGGA GCACTGGAAG
GCGAAGGGGC TCGACCTGTC GCCGATCTTC GCGGTGCCCT CGCGGGGCGG AGCGCGTCGA
AAGGTGCGCG AGCAGGACCA CGGTCTCGAC CGAGCGCTCG ACCGTACGCT CGTCCAGCTC
GCCGAGGCGG CGTTGGAGGA CGCACGGCCG GTGCGACTGG AGCTTCCGGT GCGCAACGTC
AACCGCACCG TGGGAACCCT GCTCGGGTCG GAGGTCACCC GTCGCTACGG CAGTACGGGG
TTACCGGATG ACACCATCCA CGTGCGACTC ACCGGTTCGG CGGGCCAGTC ACTCGGGGCG
TTCCTGCCGC CGGGAGTGAC GATCGACCTG GTGGGCGACG CCAACGACTA CGTCGGCAAG
GGTCTGTCGG GCGGACGCAT CATCGTGCGT CCCGACCCCG AGGCGCCGTT CGCCGCCGAG
GACCAGGTGA TCGCGGGCAA CACACTCGCC TACGGCGCCA CGTCGGGCGA GCTCTTCCTG
CGGGGCCAGG TCGGGGAGCG GTTCGGGGTT CGTAACTCGG GCGCTCTGCT GGTCGCCGAG
GGCGTGGGTG ATCACGCGTT CGAGTACATG ACCGGCGGCT ACGCCGTCGT CCTGGGCGGA
ACGGGTCGCA ACGTGGCCGC CGGGATGTCG GGCGGCATCG CGTACGTGCT GCGGCTCGAC
GAACGTGACG TGAATCCCGA GATGGTCGAA CTGCACACAC CGGACGAGGA GGACCTCGCC
TGGCTGCGTG ACGTCGTGGA GCGACACCAC CGGCTCACCG GCTCGCCGGT CGCGGCTTCC
CTGCTCGGTG ACTGGAAACG ACGGTCCGCG GCGTTCGTGA AGGTGATGCC CACGGACTAC
CGTCGTGTCC TGGAGGCCAT GGAGGCGGCG AAGGCGCAGG GGCGGGACGT CGACGAAGCG
ATCATGGAGG CGGCGCGTGG CTGA
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| Protein sequence | MTTQGVPLIF SAIPEKQGVY DPAAEKDACG VAMIAHVKGV RSHGIVTDGL TALMNLDHRG
AAGAEPTSGD GAGILVQLPD DFLRAEVDFA LPEPDERGRH RYAAGLVFLP AEAEARARAV
RTVERIATEE NLVVLGWREV PTAPDAAEVG PTARSVMPHF AMLFVAEAPN ADGDRRAGVD
LDRLAFCLRK RAEHETLAAE CGVYFPSLSA RTLVYKGMLT PTQLPVFFPD LRDERLTSAI
ALVHSRFSTN TFPSWPLAHP FRFVAHNGEI NTIRGNRNRM RAREALLDSD LIPGDLSRLF
PVCSPDGSDS ASFDEVLELL HLGGRSLPHA VLMMIPEAWE NHRTMDPARR AFYQFHASLM
EPWDGPACVT FTDGSLVGAV LDRNGLRPAR WWRTADDRVV FASESGVLDV PAGEVVAKGR
LKPGRMFCVD TEAGRVVDDD EIKADLAAQA PYEEWLRAGL LSLDKLPERQ HVPQSHASVL
RRQLTFGYTE EELKVLLAPM ALKGAEPVGS MGSDTPPSVL SKRSRLLYEY FKQGFAQVTN
PPLDAIREEL VTSLSRVMGP EQNLLAPGPA SCRQIQLDSP VIDNDELAKL IHVNADGDLP
GFSCTVLSGL YEVDGGGEAL AEAIERVRKE ASQAVEAGAH ILVLSDRGSD HRMAPIPSLL
LVSAVHHHLV RTKERLRVAL VVETGDAREV HHIALLLGYG AAAVNPYLAF ESIEDLIAQG
AVSGVDAPTA VRNYITALNK GVLKIMSKMG ISTVGAYTGA QVFEALGLSQ DVLDEYFTGT
VSPLGGVGLD VLAEEVAIRH RRAYPENPAE RAHRGLESGG DYAYRREGEL HLFTPETVFL
LQHASASRRW EVYRRYVDEV NRLNREGGVL RGMFAFREGV RKPVPIEEVE SVESICRRFN
TGGMSYGSLS LEAHQTLAVA MNTIGGRSNS GEGGEEPDRL HDPLRRSAVK QVASGRFGVT
SEYLVSADDI QIKMAQGAKP GEGGQLPPHK VYPWIAKTRH STPGVGLISP PPHHDIYSIE
DLAQLIHDLK NANERARIHV KLVSSLGVGT VAAGVAKAHA DVVLISGHDG GTGASPMNSL
KHAGTPWEIG LAQTQQTLML NGLRDRITVQ VDGGFKTGRD VVVAALLGAE EYGFATAPLV
VAGCVMMRVC HLDTCPVGVA TQNPALRERF TGRAEHIVNF FRFVAQEVRE YLARLGFRSL
DEVIGRADLL DVDEAVEHWK AKGLDLSPIF AVPSRGGARR KVREQDHGLD RALDRTLVQL
AEAALEDARP VRLELPVRNV NRTVGTLLGS EVTRRYGSTG LPDDTIHVRL TGSAGQSLGA
FLPPGVTIDL VGDANDYVGK GLSGGRIIVR PDPEAPFAAE DQVIAGNTLA YGATSGELFL
RGQVGERFGV RNSGALLVAE GVGDHAFEYM TGGYAVVLGG TGRNVAAGMS GGIAYVLRLD
ERDVNPEMVE LHTPDEEDLA WLRDVVERHH RLTGSPVAAS LLGDWKRRSA AFVKVMPTDY
RRVLEAMEAA KAQGRDVDEA IMEAARG
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