| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_27940 |
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| Symbol | |
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| ID | 8388118 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 3025988 |
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| End bp | 3026776 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644976825 |
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| Product | flavin-dependent oxidoreductase, F420-dependent methylene-tetrahydromethanopterin reductase |
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| Protein accession | YP_003134602 |
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| Protein GI | 257056770 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases |
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| TIGRFAM ID | [TIGR03560] probable F420-dependent oxidoreductase, Rv1855c family |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.632404 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0133043 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACCA CGACAGGACG GCCGATCCGC ATCGGGTTGC AGCTTCAGCC GCAACACGCC
GACTACGACG ACATCCGCCG CGCGGTGGCG GAGGCCGAGG AACTCGGCGT GGACATCGTC
TTCAACTGGG ATCACTTCTA CCCGTTGAGC GGTGATCCCG AGGGCAAGCA CTTCGAGTGT
TGGACCATGC TGGGCGCCTG GGCGGAGACG ACGTCCCGGG TCGAGATCGG GGCGCTCGTG
ACCTGCAACA GCTATCGCAA CCCCGAGCTG TTGGCCGACA TGGCCCGCAC CGTGGACCAC
ATCAGCGGCG GCCGACTCAT CCTCGGCATC GGTGCGGGCT GGTTCGAGAA GGACTACGTG
GAGTACGGCT ACGAGTTCGG CACCGCGGGC AGCAGGATCG CCGACCTCGG CAAGGCCCTG
CCCCGCATCG AGCAGCGGTT CGCGAAGCTC AACCCACCGC CGACACGCGA AATCCCCGTG
CTCATCGGTG GGGGTGGGGA GAAGAAGACC CTGCGGCTGG TGGCGAAGCA CGCCGACATA
TGGCACAGCT GGGGTGATGT CGAGGTGGCC CGCCGAAAGG TGCGGATCCT CGACCAGCAC
TGCGCGGACG TGGGACGTGA CCCGGCCGAG ATCGAACGGT CCATCGGCGT GTCCGGTTCA
CCGTCCGCCT CCGGCGACCA GCTCGCGGAA CTCGGCATCA CGCTGTTCAC CCTGAGTTCC
AGCGGCCCCG ACTACGACTT CGGCCCACTG CGTGAGTGGC TGGCGTGGCG GGACAGCCGA
AACGGCTGA
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| Protein sequence | MTTTTGRPIR IGLQLQPQHA DYDDIRRAVA EAEELGVDIV FNWDHFYPLS GDPEGKHFEC
WTMLGAWAET TSRVEIGALV TCNSYRNPEL LADMARTVDH ISGGRLILGI GAGWFEKDYV
EYGYEFGTAG SRIADLGKAL PRIEQRFAKL NPPPTREIPV LIGGGGEKKT LRLVAKHADI
WHSWGDVEVA RRKVRILDQH CADVGRDPAE IERSIGVSGS PSASGDQLAE LGITLFTLSS
SGPDYDFGPL REWLAWRDSR NG
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