Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_27630 |
Symbol | |
ID | 8388087 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 2988757 |
End bp | 2990010 |
Gene Length | 1254 bp |
Protein Length | 417 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644976794 |
Product | arabinose efflux permease family protein |
Protein accession | YP_003134571 |
Protein GI | 257056739 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTGGGG ACACGCTGTG GCGCCATCGC GACTTCCGCC TGCTGTGGGC GGGTCAGACG GCCAGTCAGT TCGGCACCTT CGTCGGTGTG ACCGTGCTTC CCGTCCTCGC GGTCACGACC CTGGCCGCGA CACCTCTGGA GATGGGACTG CTGACCGCCG CCGAGAACGC CGCGTTCCTC CTGTTGGGCC TCCCCGCGGG GGTGTGGGTG GATCGGATGC GCCGCAGACC GCTCATGGTG CGTGCCGACC TCATCCGAGG ACTGCTGTTG CTGACGATCC CACTCGCCTG GTGGGCCGGA GCGTTGACAC TGGTTCACCT GGTCACCGTG GCCACGCTGG TGGGCGCCTG CACGGTCTTC TTCGACATCG CGTACCAGTC GTACCTGCCG TCACTGGTGG GACGGGGAAA GCTGGTGGAC GGCAATGCGA AGCTCCAGGT CAGCCAGTCG GTCGCCAATG TCGGCGGCCC CGGGCTGGCC GGTACGCTCA CCCACTTGCT CGGTGCCGCC AACGCATTGG CCACCGTCGG TGGAAGTTAT CTGGCGTCGG CATGGTTCCT GCGTCGTATC CGGACCGAAG AACCCCCGCC GACCCCGCAC GCCGGTCAAC CGGGTCTGCG TGCGCAGGTG GCCGAGGGGC TGCGGTTCGT GTTCACCACT CCCTCACTGC GGGCCATCAC GCTGTGCACC GCCTCGGCGA ATTTCGCGGG CGGCATGTTC ACCGCGGTGG AGGTACTGTT CTTGACCCGC GAACTGCACC TGTCCCCCGC CGGTGTCGGC TGGCTGCTCG CCTGCCACGG AGTCGGTGGC GTCCTCGGCG CGGTCACCGC GGGCCGACTA CTGGAACGCG TCGGTCTCGT CCGTGCCATC TGGCTGGTAC CACTGGTGAC CTGGCCCGCC CAGCTGCTCG TACCACTGTC CGAACCGGAC TGGCGCATCG CCCTCGCCGC GGTGGCGTTC GTGATCGTCA GCTACGGGAT CATCGTCTAC AACGTCGCAC AGGTCAGCTA TCGCCAGACC CTCTGCCCCG ACCACCTGCT GGGCCGCATG AACGCCAGCG TGCGGTTCCT CATCTGGGGA GTGCTGCCGA TCGGAAGCCT GCTCGGTGGT GTGGCAGGAC AGTGGTTGGG CGTATCGGCG ACCGTGTGGC TGTGCTCGGC GGGCAACGTC CTGGCCCTGT TGTGGGTGTT GCTGTCCCCG CTGCGCCGCA CCCCGGACCC GGTGCCACCG AGTACCCGCC CGGTGGCCAG CTGA
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Protein sequence | MPGDTLWRHR DFRLLWAGQT ASQFGTFVGV TVLPVLAVTT LAATPLEMGL LTAAENAAFL LLGLPAGVWV DRMRRRPLMV RADLIRGLLL LTIPLAWWAG ALTLVHLVTV ATLVGACTVF FDIAYQSYLP SLVGRGKLVD GNAKLQVSQS VANVGGPGLA GTLTHLLGAA NALATVGGSY LASAWFLRRI RTEEPPPTPH AGQPGLRAQV AEGLRFVFTT PSLRAITLCT ASANFAGGMF TAVEVLFLTR ELHLSPAGVG WLLACHGVGG VLGAVTAGRL LERVGLVRAI WLVPLVTWPA QLLVPLSEPD WRIALAAVAF VIVSYGIIVY NVAQVSYRQT LCPDHLLGRM NASVRFLIWG VLPIGSLLGG VAGQWLGVSA TVWLCSAGNV LALLWVLLSP LRRTPDPVPP STRPVAS
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