Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_27560 |
Symbol | |
ID | 8388080 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 2979681 |
End bp | 2980457 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644976787 |
Product | predicted nucleoside-diphosphate sugar epimerase |
Protein accession | YP_003134564 |
Protein GI | 257056732 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0702] Predicted nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.235843 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACGG TGGTGGTGAC CGGAGGAACC GGCACACTCG GTCGTGAGGT CGTACGCCAC CTCGTGGAGG ACGGGCACGA CGTCGTCGTC ACGAGTCGAT CGGCGACACC GTCGGTGTGG GATAGTGCCC GGACGGTACA GGTCGACTAC CGGTCACCCG GTACGCTCCG TACCGCTTTC GAAGGGGCCG ACGCGATCGT GCACTGTGCG ACCAGGGTCT CCGGTCGACG GGGCGGTGAC GTGGACCTCA CTGGTCGCGT GCTGGACGCC GCCCGCCACA CCGGATGCGG AAACCTGGTC TACATCTCGA TCGTCGGGGT CGATCGCATA CCGCTTCGGT ATTACCGGAC CAAAATCGAG GCCGAACGGC TCATCGAGGA CAGTGGTCTA CCGTGGACGA TCCTGCGGAC CACCCAGTTC CACCAGCTCG TCATCCGGCT GCTGAACGCA TTGACACGTC CACCGCTGGC CTTGGTCCCG GACCTCTCCG TGCAACCGAT CGCTGCCGCC GAGGTGGGCG CGCGGCTGGC CGAACTGGCC ACCGCGCGCC CCGCCGGACG GGTCCCCGAC ATGGGTGGGC CCGAGATCCT CGCCGTGCCC GACCTGGCGC GGCGCTACCT TGAGGCCATC GGCCGACATC GTCTCGTCCG CCCGATCCGG CTCTTCGGTT CCGTGTACAA GGGTTTCCGC GCGGGTCACC ACCTCGCGCC CGCGAACGCC TCGGGCACGA TCACGTTCCA GGAGTACCTC AACGCGCGGA TGCGTTCCCC TCGTTGA
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Protein sequence | MSTVVVTGGT GTLGREVVRH LVEDGHDVVV TSRSATPSVW DSARTVQVDY RSPGTLRTAF EGADAIVHCA TRVSGRRGGD VDLTGRVLDA ARHTGCGNLV YISIVGVDRI PLRYYRTKIE AERLIEDSGL PWTILRTTQF HQLVIRLLNA LTRPPLALVP DLSVQPIAAA EVGARLAELA TARPAGRVPD MGGPEILAVP DLARRYLEAI GRHRLVRPIR LFGSVYKGFR AGHHLAPANA SGTITFQEYL NARMRSPR
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