| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_27450 |
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| Symbol | |
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| ID | 8388069 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 2962655 |
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| End bp | 2964118 |
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| Gene Length | 1464 bp |
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| Protein Length | 487 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644976776 |
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| Product | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase |
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| Protein accession | YP_003134553 |
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| Protein GI | 257056721 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0770] UDP-N-acetylmuramyl pentapeptide synthase |
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| TIGRFAM ID | [TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.433465 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTGAAC TCACTCTCGC CGAGATCGCC GAGGCCGTCT CGGGGCGGCT GCACCGGGCC
GACGGCGGCG AGCGGGTCAC CGGTTCGGTC GAGTTCGACT CCCGCAAAGT GACGGATGGC
GGGTTGTTCG TGGCGTTGCC GGGCGAACGT GCCGACGGTC ACGACTTCGC GGCCTCCGCG
GTGGCCGCGG GTGCGGCCGG GGTGTTGGCG GCGCGTGAGG TCGACGCTCC GGCGGTGATC
GTGCCCCCGT TGCCCCCGGG CCAGGCCCAC GAAAGGTCCG TGGCCCTGGC CGGGGACACC
GACGGGTCCG GTGCCGCTGT GCTCGCCGCG TTGGCCGCGC TCGCCCGGCA CGTCGTGACC
CGGCTGTCGG AGACCGGTCT CACGGTCGTG GGGGTCACCG GTTCCTCGGG CAAGACGTCC
ACCAAGGACC TGATCGCGCA GTTACTCGAA CCGCTCGGCC CCACGGTGGC TCCCCCGGGG
TCGTTCAACA ACGAGTTGGG CCACCCCTGG ACGGCGTTGC GTGCCGATCG AAAAACCCGG
CACCTGGTGC TCGAACTGTC GGCGCGTGGG CCGGGGCACA TCGCGGAACT GGCCGCGGTC
GCACCGCCGC GGATCGGGGT GGTGCTCAAC GTCGGTAGCG CGCACGTGGG GGAGTTCGGT
TCCCAGGAAG GCATCGCGCG GACGAAGGGG GAGCTCGTCG AGGCGCTGCC CGCCGAGGGG
GTCGCGGTGC TCAACGTGGA CGATCCGTTC GTGGCCGAGA TGGCTCAACG CACGTCCGCC
CGGGTCGTGG GTGTCGGGGA GTCACCGAAG GCCGACGTGC GTGCGGAGAA CGTCCGATTG
GACGAACACG CGCGTGCGTC CTTCGACCTG GTGGCCGGCG GGGAACGAGC CGAGGTGAGG
TTGCAACTGG TGGGTGAGCA CCACGTCGGC AACGCTCTTG CGGCCGCCGC CGTGGCGCTG
GAACTCGGTA TGCCGCTGTC CGAGGTCGCG GCCGGGCTCA GTGCCGCCAC GCGTCGTTCG
GAGCGGCGGA TGGAGGTCAC CACCCGTTCC GACGGGGTCA CCGTGCTCAA CGACTCCTAC
AACGCCAACC CCGAGTCGAT GCGGGCCGCG TTGAAGACTC TCGCGTCCAT GACCTCGTCC
CGACGATCTT GGGCGGTCCT CGGTGTCATG AGTGAACTGG GGGCCGATAG CGTGTCCGCG
CACGACGAGA TCGGTCGGCT CGCCGTCCGG TTGAACATCA ACCGGCTTGT CGTGGTGGGC
GAGCAGGCAG CCGCCATGCA CCGCGGCGCG AGCCATGAAG GTTCTTGGGG AGAGGAGTCG
GTCCTGGTAC CGGACACCGA CGCCGCTGTC GCGCTGTTGC GCGAACAACT GCGGCCCAAC
GACGTTGTTC TTGTCAAGGC ATCGAAGGTC GCCGAGCTGT GGCGGGTGGC CGACGCGCTG
TTGGAAGAGG ACGGTGGCGC GTGA
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| Protein sequence | MIELTLAEIA EAVSGRLHRA DGGERVTGSV EFDSRKVTDG GLFVALPGER ADGHDFAASA
VAAGAAGVLA AREVDAPAVI VPPLPPGQAH ERSVALAGDT DGSGAAVLAA LAALARHVVT
RLSETGLTVV GVTGSSGKTS TKDLIAQLLE PLGPTVAPPG SFNNELGHPW TALRADRKTR
HLVLELSARG PGHIAELAAV APPRIGVVLN VGSAHVGEFG SQEGIARTKG ELVEALPAEG
VAVLNVDDPF VAEMAQRTSA RVVGVGESPK ADVRAENVRL DEHARASFDL VAGGERAEVR
LQLVGEHHVG NALAAAAVAL ELGMPLSEVA AGLSAATRRS ERRMEVTTRS DGVTVLNDSY
NANPESMRAA LKTLASMTSS RRSWAVLGVM SELGADSVSA HDEIGRLAVR LNINRLVVVG
EQAAAMHRGA SHEGSWGEES VLVPDTDAAV ALLREQLRPN DVVLVKASKV AELWRVADAL
LEEDGGA
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