Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_26200 |
Symbol | |
ID | 8387944 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 2824153 |
End bp | 2825337 |
Gene Length | 1185 bp |
Protein Length | 394 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644976658 |
Product | glycine betaine/L-proline transport ATP binding subunit |
Protein accession | YP_003134435 |
Protein GI | 257056603 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4175] ABC-type proline/glycine betaine transport system, ATPase component |
TIGRFAM ID | [TIGR01186] glycine betaine/L-proline transport ATP binding subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCCAAG CACGCAACGT GACGAAGGTG TTCGGCCTCC CGGCCGGACG AGCGCGCGAG ATCTTGGACG AGGCCGAGGA TCGCTCCCGC GCGATCACAG CGGCCGGCGG CGTCCTGGCG GTGGACGACG TGTCGTTCGA TGTGGCCCAA GGTGAGCTCT TCGTCATCAT GGGGTTGTCG GGATCCGGGA AGTCGACGCT GATCCGCATG GTCAACCGAC TGGTGGAGCC GACCGCGGGA CAGATCTACT ACGACGGAAC CGACATCGCC GCCATGGGCG AGGCGCAACT GCGCGAACTG CGCAACAAGC GGCTGAGCAT GGTGTTCCAA CACTTCGCCC TGTTCCCGCA CCGCACCATC CGAGACAACG CCGCGTACGG GCTCAAGACG CGGGGAGTCC CCAGGCACGA ACGACTCGAA CGAGCCGACC AGGCACTGCA CCAGGTGGGA CTCGGGCAGT GGGGCGACGC CTATCCCGAG GAACTCAGCG GCGGGATGCA ACAGCGCGTC GGACTGGCGC GCGCGCTGGC CACCGACCCC GAAGTGCTGA TCATGGACGA GCCGTTCAGC GCCCTCGACC CGCTCAACCG GCGCGCGATG CAGGAACAAC TGTTGGAACT GCAGTCCACG TTCCGTAAGA CGATCCTGTT CGTCACGCAC GACCTCAACG AGGCCATGCG CCTCGGTGAC CGGATCATGG TGCTGCGGGG CGGCACGGTG GTCCAGCTCG GCACGGGACC GCAGATCATC GCCCAGCCCG CCGACGAGTA CGTGCACGAC TTCGTCTCCG ACGTCGACCG CTCCCGCGCC CTGACCGCGG GCTCGATCAT GACCGAACCG TGGCTGACGG CGACGGTGGA CGACGACGCC GCCTCCGTGC TGGAGAAGCT CGACAGAACC CCCGCCAAGG GGCTGTACAT CCTCGACCAG GACCACCGGG TGGTGGGGGT CGCCAGCGGG GAGGCCCTGT CCCGCGCGGC GGCGGACGGT GAACGCGACC TGCGGCGCTG CCTCGACACC GACTACGCCT GGGTCGCCGA GGGGACGTCA CTGGCCCGGT GTTGCCACCT CACCGGAGGT GACGTCGTCC CGCTGGCGGT GCTCGACGCG GACAAGCACC TGCTCGGGGT CGTCCCCAAA ACGGAGATGC TCCGCGCCAT CGCGACTCAG GAAGAGGGTG ACTGA
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Protein sequence | MFQARNVTKV FGLPAGRARE ILDEAEDRSR AITAAGGVLA VDDVSFDVAQ GELFVIMGLS GSGKSTLIRM VNRLVEPTAG QIYYDGTDIA AMGEAQLREL RNKRLSMVFQ HFALFPHRTI RDNAAYGLKT RGVPRHERLE RADQALHQVG LGQWGDAYPE ELSGGMQQRV GLARALATDP EVLIMDEPFS ALDPLNRRAM QEQLLELQST FRKTILFVTH DLNEAMRLGD RIMVLRGGTV VQLGTGPQII AQPADEYVHD FVSDVDRSRA LTAGSIMTEP WLTATVDDDA ASVLEKLDRT PAKGLYILDQ DHRVVGVASG EALSRAAADG ERDLRRCLDT DYAWVAEGTS LARCCHLTGG DVVPLAVLDA DKHLLGVVPK TEMLRAIATQ EEGD
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