| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_26180 |
|---|
| Symbol | |
|---|
| ID | 8387942 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | + |
|---|
| Start bp | 2821836 |
|---|
| End bp | 2822744 |
|---|
| Gene Length | 909 bp |
|---|
| Protein Length | 302 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 644976656 |
|---|
| Product | transcriptional regulator |
|---|
| Protein accession | YP_003134433 |
|---|
| Protein GI | 257056601 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.112143 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGCGGA AGCAGCTGGA ATACTTCCTC GCCATCGCGG CACACGGCAG CTTCACCAGC
GCCGCCGGTT CCCTACACGT CTCCCAGCCG TCCCTGTCCT ACGCCATCCG GGGCCTGGAG
AAGGAGATAG GCGCTCCCCT GTTCCGACGC CTCGGCCGCG GCGTCGCGCT CACCCCCGCC
GGAGAAGCCC TCCTCCCCTC GGCCCGCCGG GTCATCCAGG CCTTCGCCCG ATTCCACACG
GAGGCGCAAC GGATAACCCA GGTGGTGTCC GGCCGGCTCG ACATCATGAC GGTGACCACC
CTCGCCGTCG ACCCCTTGGC ACCGCTGGTG GGGGCGTTCC GCGAGCGCCA TCCCGGCGTC
GAACTGAGTA TCGTCGACCC CGAGAACGCC GCCGCGGTCG TCTCCGCCGT CCGCAACGGG
GAATGCGAGC TGGGCCTGAC CGAGCACGGC ATCGCCGCGG AGGGAATGGT GGTGCTCGAT
CTTCCGGAGC AGGAACTGTA CGCCGTTCTG CCACCGAGAA CCGAGCTGAA ACCACCCGGC
CCGATCACCG CCCGACAACT CGCCGCCCTC GACATCGTCA CCACGCCACC GGGAACGACG
ACCCGCAGCG CGGTGGACAA CGTCCTCGCC AGCGCGGGGG CGACCACCCG GGTCGCGGTC
GAGGTGACCC ACCGAGCCGC CATCGTGCCG CTGGTCCTCG CCGGCGCGGG CGCCACCCTG
TTACCGAGCC GCCTCGCCCG CGATGCCGCC AGCCGGGGAG CGGTCATCGC ACCGTTGAAC
CCACCGGCGA CCCGGCACGG CGTCCTGGTT TTCCTGCCCA CCCAGCTCTC CCCCGCGGCA
CAAGCGTTCG TCGAGCTCGT CAAAGAATGG GAATCCCCAG CACGAATGCC ACGGGACCAC
AACTTATAG
|
|---|
| Protein sequence | MERKQLEYFL AIAAHGSFTS AAGSLHVSQP SLSYAIRGLE KEIGAPLFRR LGRGVALTPA
GEALLPSARR VIQAFARFHT EAQRITQVVS GRLDIMTVTT LAVDPLAPLV GAFRERHPGV
ELSIVDPENA AAVVSAVRNG ECELGLTEHG IAAEGMVVLD LPEQELYAVL PPRTELKPPG
PITARQLAAL DIVTTPPGTT TRSAVDNVLA SAGATTRVAV EVTHRAAIVP LVLAGAGATL
LPSRLARDAA SRGAVIAPLN PPATRHGVLV FLPTQLSPAA QAFVELVKEW ESPARMPRDH
NL
|
|---|
| |