| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_25880 |
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| Symbol | |
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| ID | 8387912 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 2789112 |
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| End bp | 2791271 |
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| Gene Length | 2160 bp |
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| Protein Length | 719 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644976628 |
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| Product | excinuclease ABC subunit B |
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| Protein accession | YP_003134406 |
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| Protein GI | 257056574 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0556] Helicase subunit of the DNA excision repair complex |
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| TIGRFAM ID | [TIGR00631] excinuclease ABC, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCATTCG CGACCGAACA CCCCGTACTC GCGCACTCAG AATTCCGGCC GGTCTCCGAG
ATCCCTCGGT CGGACGGTCG GTTCAAGGTG GTCAGTGACT ACGAGCCCGC CGGCGACCAG
CCCGCGGCCA TCGACGAACT CGAACGCAGG ATCAAAGCGG GCGAAAAGCA CGTCGTTCTC
CTCGGCGCCA CCGGTACGGG CAAGTCCGCG ACCACGGCGT GGCTGATCGA ACGGCTCCAG
CGACCCACTC TCGTGATGGC CCACAACAAG ACGCTGGCCG CCCAGCTCGC CAACGAACTG
CGCGAATTCT TCCCGCACAA CGCGGTGGAG TACTTCGTCA GCTACTACGA CTACTACCAG
CCCGAGGCGT ACGTCCCCCA GACCGACACC TACATCGAGA AGGACTCCTC GATCAACGAC
GACGTGGAGC GGCTTCGCCA CTCGGCGACG ATGAACCTGC TGTCCCGCCG CGACGTCATC
GTGGTGTCCA GCGTGTCCTG CATCTACGGC CTCGGCACCC CGCAGTCGTA CCTCGACCGC
TCGACCCGCC TCGCGGTGGG TGAGGAGGTG GACCGCGACA CGTTCCTGCG CGCGCTCGTG
GACGTGCAGT ACACCCGTAA CGACCTCGCG TTCGAACGCG GCACGTTCCG GGTCCGGGGC
GACACCGTGG AGATCATCCC GGCGTACGAG GAGCTCGCCA TCCGGGTGGA GTTCTTCGGC
GACGAGATCG ACAAGCTGTA CTACCTGCAT CCACTGACCG GTGACATCGT CAGGGAGGTC
GACGAGGTCC GGATCTTCCC GGCCACCCAC TACGTCGCGA GCCCGGAGCG CATGGAGAAG
GCCATCCGCG GTATCGAGGC CGAACTCGAA GAGCAGATCG CCAAGCTGGA GAGGCAGGGC
AAACTGCTGG AGGCACAGCG CCTGCGGATG CGCACCACCT ACGACATCGA GATGATGCGG
CAGGTCGGGT TCTGCTCCGG CATCGAGAAC TACTCGCGGC ACATCGACGG ACGGGAACCC
GGTTCGGCGC CGGCGACGCT GCTCGACTAC TTCCCCGAGG ACTTCCTGCT GGTCATCGAC
GAATCGCACG TGACGGTGCC GCAGATCGGC GGCATGTACG AAGGCGACGC GTCGCGCAAA
CGGACCCTGG TGGAGCACGG CTTCCGACTG CCCAGCGCCC TGGACAACCG GCCGTTGACC
TGGGAGGAGT TCTCCGACCG CATCGGTCAG ACCGTGTACC TGTCCGCGAC ACCGGGCCCG
TACGAGATGA GCCAGACGGG CGGGGAGTTC GTCGAACAGG TCATCCGGCC CACCGGTCTC
GTCGACCCTG AGGTCATCGT CAAGCCCACG GAGGGGCAGA TCGACGACCT GGTGCACGAG
ATCCGCATCC GCGCCGAGAA GGACGAGCGC GTGCTGGTCA CCACGCTGAC CAAGAAGATG
GCCGAGGACC TCACCGACTA CCTGCTCGAA CTCGGCATCC GGGTGCGGTA CCTGCATTCG
GAGATCGACA CGCTACGCCG GGTGGAACTG CTACGGCAGC TACGGTCCGG TGACTTCGAC
GTGTTGGTCG GCATCAACCT CCTGCGTGAG GGCCTCGACC TGCCGGAGGT GTCGCTCGTG
TCGATCCTCG ACGCCGACAA GGAGGGCTTC CTCCGCAGCA GTACGTCACT GATCCAGACG
ATCGGCCGGG CGGCGCGGAA CGTGTCAGGG CAGGTGCACA TGTACGCCGA CACGATCACC
GATTCGATGC GCTACGCCAT CGACGAGACC AACCGGCGTC GCGAGAAACA GATCGCGTAC
AACAAGGAGC ACGGCATCGA TCCGAAGCCC CTGCGTAAGA AGATCGCCGA CATCCTCGAC
CGTGTCTACA CCGAGGCCGA GGACTCCGAG CTGGGGATCG AGGTCGGTGG CTCCGGACGC
AATGTCTCGC GGGGCAAGAC GCCGGAGCAG GGCGACCGGA AACGCAGTTC CGGTGTTCTC
GTCGACCGCG ACGTGAGCAA CATGCCGAGG GCGGAGCTCG CCGACCTCAT CCGACAATTG
ACCGATCAGA TGATGCAGGC CGCCCGCGAC CTGCAATTCG AGCTGGCCGC TCGGCTGCGC
GACGAGATCT CCGAACTGAA GAAGGAGCTG CGCGGAATGG ACGAGGCGGG AGTGCAATAA
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| Protein sequence | MAFATEHPVL AHSEFRPVSE IPRSDGRFKV VSDYEPAGDQ PAAIDELERR IKAGEKHVVL
LGATGTGKSA TTAWLIERLQ RPTLVMAHNK TLAAQLANEL REFFPHNAVE YFVSYYDYYQ
PEAYVPQTDT YIEKDSSIND DVERLRHSAT MNLLSRRDVI VVSSVSCIYG LGTPQSYLDR
STRLAVGEEV DRDTFLRALV DVQYTRNDLA FERGTFRVRG DTVEIIPAYE ELAIRVEFFG
DEIDKLYYLH PLTGDIVREV DEVRIFPATH YVASPERMEK AIRGIEAELE EQIAKLERQG
KLLEAQRLRM RTTYDIEMMR QVGFCSGIEN YSRHIDGREP GSAPATLLDY FPEDFLLVID
ESHVTVPQIG GMYEGDASRK RTLVEHGFRL PSALDNRPLT WEEFSDRIGQ TVYLSATPGP
YEMSQTGGEF VEQVIRPTGL VDPEVIVKPT EGQIDDLVHE IRIRAEKDER VLVTTLTKKM
AEDLTDYLLE LGIRVRYLHS EIDTLRRVEL LRQLRSGDFD VLVGINLLRE GLDLPEVSLV
SILDADKEGF LRSSTSLIQT IGRAARNVSG QVHMYADTIT DSMRYAIDET NRRREKQIAY
NKEHGIDPKP LRKKIADILD RVYTEAEDSE LGIEVGGSGR NVSRGKTPEQ GDRKRSSGVL
VDRDVSNMPR AELADLIRQL TDQMMQAARD LQFELAARLR DEISELKKEL RGMDEAGVQ
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