Gene Svir_25090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_25090 
Symbol 
ID8387833 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2702566 
End bp2703483 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content67% 
IMG OID644976549 
Productchromosome partitioning ATPase 
Protein accessionYP_003134330 
Protein GI257056498 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG1192] ATPases involved in chromosome partitioning 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.419611 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCACACGG TCGCCGTACT GAGCCTCAAG GGAGGCGTCG GCAAAACGAC GGTCGCTCTG 
GGTATCGCCT CGGCTGCGCT CCGCAGGGGA ACCCGGACAC TGGTGGCCGA CCTCGATCCG
CAGGGCAACG CCACCGCCAC ACTGGATCCT CCACTGACCG ACGCCACACT CGCGGATGTA
CTGGAGGCAC CTCGACTCGG GGTGCTGCTG AAAGCGATCG CGGCCAGCGG ATGGAGCGAC
GAAGTCGACG TGCTCGTCGG GTCGGAGGAC CTCGAGCTCC TCAACGAGCC GGGTCCACAC
GCGCATCGCA TGGACAACCT GGCGAGGGCG CTCCACGAAC TGCGCACCTA TCCGCAGGGC
AAGCCCTACG AGCTCGTCAT CCTCGACTGT CCACCGTCGC TCGGGCGGTT GACCCGCTCC
GCACTCATCG CCGCCGACAG CGCCCTCCTC GTCACCGAAC CCACGATGTA CGCGGTGGCG
GGTGCGCAAC GCGCGCTGGA AGCCATCGAC AACATCCGCG TCGAGCACAA CCCCCGACTG
CGTCCGGCGG GAGTCGTGGT CAACCGGCTT CGTAGCCGGT CGTACGAACA CGAGTACCGC
GTTCAGGAAC TACGGGAGTC GTTCGGGCGG CTGGTGATGC CCACGGCGAT CCCCGACCGC
TTGGTCATCC AACAAGCGCA GGGCGCCTGC ACCCCCATCC ACGAATGGAA CTCGCCCGCG
GCACAGGAGA TCGCGCTGAC CTTCAACATG GTGCTTGCGA AGATCCTGCG GTCCGACCGC
GCGGGACGCC ATCGGCTCGC CGCACAGCAG CCGACCGAAC ACCCTCCGGT CAGGCACGAG
GGGCATCCCC CTATCCCGCC CAGGCGGGAG GGACATGTAC CTCGTCTGCC CGCCGGACGA
CCGCACATCG ACCACTAA
 
Protein sequence
MHTVAVLSLK GGVGKTTVAL GIASAALRRG TRTLVADLDP QGNATATLDP PLTDATLADV 
LEAPRLGVLL KAIAASGWSD EVDVLVGSED LELLNEPGPH AHRMDNLARA LHELRTYPQG
KPYELVILDC PPSLGRLTRS ALIAADSALL VTEPTMYAVA GAQRALEAID NIRVEHNPRL
RPAGVVVNRL RSRSYEHEYR VQELRESFGR LVMPTAIPDR LVIQQAQGAC TPIHEWNSPA
AQEIALTFNM VLAKILRSDR AGRHRLAAQQ PTEHPPVRHE GHPPIPPRRE GHVPRLPAGR
PHIDH