Gene Svir_24710 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_24710 
Symbol 
ID8387795 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2664347 
End bp2664943 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content68% 
IMG OID644976511 
Producttranscriptional regulator, tetR family 
Protein accessionYP_003134292 
Protein GI257056460 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGAAC GCAGACATCG CACCCAGGCC GAACGCAGCG CTCAGACACG CACCGCCTTG 
CTCGACGCCA CCATCGAGTG CCTGGTGGAA CTCGGTTATG CACGGACGTC GATGCAGGAG
ATCTGCGCCC GAGCAGGCGT GTCCAAGGGC GCGGCTCAAC ATCATTTCGC GGACAAGGCC
GAGCTGATGG CCTCCGCGGT GGCCCACCTG ACGACGAAGC TGGCCGACCG CAACACGCCG
CGAGAGGGAC GACTGGCGTC CGGACCGGGC CGTGTGGCCG AATTAGTGGA CCTGCTGTGG
CGGTCGTATT CGGGCACCTT GGCCACAGCG GCGATGGAGT TGTGGGTCGC GGCGCGCACC
GATCCCGCTC TCCGCGCGGC GATGCGGCCG GTGGACAGGG CACTCGGCCG CTCGACATTG
GACCGACTCG CCGCCTTCCT GGACGACATT CCCCGAGAGC GCCTGGAGAC TCTGTTCTGG
CTGACGGTGA ACCTGGCCCG CGGCCTCGCG CTCGACGCCG AACTGGGAGG GGACCCCCAG
CGACGCGAGT TGCTGTTGGA CGAGTGGAAG CGCATCGCGA CCGCGCTCTT CGCGTGA
 
Protein sequence
MSERRHRTQA ERSAQTRTAL LDATIECLVE LGYARTSMQE ICARAGVSKG AAQHHFADKA 
ELMASAVAHL TTKLADRNTP REGRLASGPG RVAELVDLLW RSYSGTLATA AMELWVAART
DPALRAAMRP VDRALGRSTL DRLAAFLDDI PRERLETLFW LTVNLARGLA LDAELGGDPQ
RRELLLDEWK RIATALFA