Gene Svir_24450 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_24450 
Symbol 
ID8387769 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2635433 
End bp2635756 
Gene Length324 bp 
Protein Length107 aa 
Translation table11 
GC content63% 
IMG OID644976485 
Producthypothetical protein 
Protein accessionYP_003134266 
Protein GI257056434 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.299312 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.221864 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAAGAGC ATGATGAGCA CGCCGCCCCG GTACTGATCA CCGAGGCCGC GCCCTCCTAC 
GATGATCAAC ACGCAGCCCG CAAGCGCAAG TACCTCATCA TGATGACGAT GCGGGTGCCG
TGCCTGGTCC TGGCGGGATT CTTCTATCAA ACGTGGTGGC TGGCGCTGGG TCTGATAGTG
CTGTCGCTTC CGCTGTCGTG GATCGCGGTA CTGATCGCCA ACGACCGCCC ACCTCGCAAG
GCCGAGCGCG TCCACAAGTA TCGGCGCTCG GCTCATGCGA TCGAAAGTCA CCGGCACCGC
GTCATCGACT CCCCGGAGTC CTGA
 
Protein sequence
MKEHDEHAAP VLITEAAPSY DDQHAARKRK YLIMMTMRVP CLVLAGFFYQ TWWLALGLIV 
LSLPLSWIAV LIANDRPPRK AERVHKYRRS AHAIESHRHR VIDSPES