| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_24260 |
|---|
| Symbol | |
|---|
| ID | 8387750 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | - |
|---|
| Start bp | 2617932 |
|---|
| End bp | 2618396 |
|---|
| Gene Length | 465 bp |
|---|
| Protein Length | 154 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 644976467 |
|---|
| Product | deoxyuridine 5'-triphosphate nucleotidohydrolase |
|---|
| Protein accession | YP_003134248 |
|---|
| Protein GI | 257056416 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0756] dUTPase |
|---|
| TIGRFAM ID | [TIGR00576] deoxyuridine 5'-triphosphate nucleotidohydrolase (dut) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.0951337 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCCAGCG TGCAGGTCCT CATTTCCCGA CTCGACCCCG ATGTGGCGGT GCCCTCGTAC
GCCCATCCCG GCGATGCGGG GGCTGATCTG GTGACGACGT CCGACGTGCG CCTCGCCCCT
GGTGAACGGG CGGTGGTGGG TACCGGAGTC GCCATCGCGT TACCCGAGGG TTACGCCGGT
TTCGTGCACC CCCGGTCCGG ATTGGCGGCC AGGGTGGGCC TTTCGATCGT CAACGCGCCG
GGCACGATCG ACTCCGGTTA CCGGGGTGAG ATCCGGGTGT GCCTGGTGAA CCTCGATCCT
GTCGAGCCGA TCGTGCTGCG ACGCGGAGAC CGCATCGCGC AACTGGTGGT GCAGAAGGTG
GAGCATGCCG AGTTCATCGA GGTCGAACGA TTGGACGAGA CGGTACGGGG AGCGGGTGGC
TACGGCTCGA CCGGTGGGCA CGCCACGCTC GGAACGGAGA ACTAG
|
|---|
| Protein sequence | MSSVQVLISR LDPDVAVPSY AHPGDAGADL VTTSDVRLAP GERAVVGTGV AIALPEGYAG
FVHPRSGLAA RVGLSIVNAP GTIDSGYRGE IRVCLVNLDP VEPIVLRRGD RIAQLVVQKV
EHAEFIEVER LDETVRGAGG YGSTGGHATL GTEN
|
|---|
| |