Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_23460 |
Symbol | |
ID | 8387670 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 2536143 |
End bp | 2537114 |
Gene Length | 972 bp |
Protein Length | 323 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644976397 |
Product | ABC-type metal ion transport system, periplasmic component/surface antigen |
Protein accession | YP_003134179 |
Protein GI | 257056347 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1464] ABC-type metal ion transport system, periplasmic component/surface antigen |
TIGRFAM ID | [TIGR00363] lipoprotein, YaeC family |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.00650145 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAGCG ACAACACATC CGGTGGTCAC AACGGCGGCG ATCCCGCCGA GATCCGGCTT CCCGAGCGGC CACGCAAGGG CAAAGGCCCG TTCATCGCAC TCGGAGTCGT GTTGGTCGCC GCGCTGGTGG CGATCACCGT CGTCCTGACA GGAGGCGACG ACTCGTCCGG CCCCACCGAC ACGGTCACCG TGCGCATCGG CACCACCGAG GCCGGGTCCG ATTACTGGAA GCCCCTCAAA CGACTCGCCG CCGAGGAAGG CATCACCCTC GAGACCGTCA ACTTCAGCGA CTACAACCAG CCCAACCCGG CGCTGTCGCA AGGACAGACG GACCTGAACC TGTTCCAGCA CGTGCTGTTT CTGGCCAACT ACAATGTGTC CAACCAGGAC GACCTGACGC CCGTCGGTTC GACGTACGTG GTGCCGTTGT CGCTGTACTC GCGCAAGCAC ACCGACGTCG AGCAGATCCC GGCCGGTGGC ACGGTCGCCA TCCCGAAGGA CCCCACCAAC CAGGCCAGGG CGCTGTTGGT ACTGCAGGAA GCGGGTCTGA TCAGCCTCAA GGACGGCGGG AACGTGTTGT CCACGCCCGC CGAGATCGAC CAGGCCGCGT CGAAGGTCAG CGTGACCCCG GTGGACGCCG CCCAGACCGT GGCCGTGCTG GACTCGGTGG ACGCCTCCAT CGTCAACAAC GGTTTCGCCA TGGACGCGGG GCTCGACCCG AGCAAGGCGC TGTTCTCCGA CGACCCGCGC AGCGACGCCG CCGAGCCCTA CATCAACATC ATCGCGGCGC GTGCCGAGGA CAAGGACAAC CCGACCTATC GCCGTGTCGT CGAGCTGTTC CACCACCCCG AGGTGTTGGA GGCGCTGCGA GCCGAGTCGC GTGACACGTC CGTCCCGGTA CAGCGTCCCC AGGAGGAGCT GGAGGAGATC CTCGACCGGC TGTCCGACAC CGTGAAGGCG GCACGGCGAT GA
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Protein sequence | MASDNTSGGH NGGDPAEIRL PERPRKGKGP FIALGVVLVA ALVAITVVLT GGDDSSGPTD TVTVRIGTTE AGSDYWKPLK RLAAEEGITL ETVNFSDYNQ PNPALSQGQT DLNLFQHVLF LANYNVSNQD DLTPVGSTYV VPLSLYSRKH TDVEQIPAGG TVAIPKDPTN QARALLVLQE AGLISLKDGG NVLSTPAEID QAASKVSVTP VDAAQTVAVL DSVDASIVNN GFAMDAGLDP SKALFSDDPR SDAAEPYINI IAARAEDKDN PTYRRVVELF HHPEVLEALR AESRDTSVPV QRPQEELEEI LDRLSDTVKA ARR
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