| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_22690 |
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| Symbol | |
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| ID | 8387593 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 2440859 |
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| End bp | 2442028 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644976322 |
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| Product | xylose isomerase |
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| Protein accession | YP_003134104 |
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| Protein GI | 257056272 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2115] Xylose isomerase |
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| TIGRFAM ID | [TIGR02631] xylose isomerase, Arthrobacter type |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTCGGCA AACCCGTGGC AGAGGACAAG TTCAGTTTCG GTCTGTGGAC GGTGGGCTGG
CGGGCCGCCG ATCCGTTCGG TGACGCGACG AGGCCCGAGC TCGACGTGGT CGAGACGGTG
CACAAGCTGG CCGAACTGGG TGCGTGGGGA GTGACCTTCC ACGACAACGA CCTCATTCCC
TTCGGCAGTG ACGAGCGTGA GCGCGAGAAG CGGATCAGCC GGTTCCGGAC GGCGCTCGAC
GAGACCGGAC TCGTGGTGCC GATGGCCACC ACCAACCTGT TCACCCACCC CGTGTTCAAG
GACGGTGCGC TCACCAGCAA CGACCGTGAC ATCCGTCGGT TCGCGCTGCG CAAGGTGATG
CGCAACATGG ATCTTGCGGC CGAACTCGGC GCGACGACGT ACGTGTTGTG GGGCGGTCGT
GAGGGCAGCG AGACGGACGC GGCCAAGGAC GTGCGTGCCG CGATGGACCG CTATCGCGAA
GGGATAGACA CGCTCGCGCA GTACGTCGTG GAGCAAGGCT ACGGGCTGAG GTTGGCGCTG
GAACCCAAGC CGAACGAACC GCGCGGGGAC ATCCTGCTGC CCACCATCGG GCATGCGCTG
GCGTTCATCT CCACCTTGGA ACACCACGAG ATGGTGGGGC TCAACCCCGA GGTCGGCCAC
GAGCAGATGG CCGGGCTGAA CTTCGTGCAC GGCATCGGCC AGGCGTTGTG GCAGGGCAAG
TTGTTCCACA TTGACCTCAA CGGCCAACAC GGACCTCGGT ACGACCAGGA CCTCGTGTTC
GGACACGGCG ACGTGCTGTC GGCGTTCTTT TTGGTGGACC TGCTCGAACA CGGCGGATAC
GACGGCCCCC GACACTTCGA CTACAAGCCG CCGCGTACCG AGGACATCGA CGGTGTGTGG
GCCAGCGCGG AGGCCAACAT GCGGTCGTAT CTGTTGTTGC GGGAGCGGGC GAAGGCCTTC
CGTGCCGACC CGCGGGTGCA GGAGGCGCTG GAACGTTCCC GGGTGCCGGA ACTGGCGCAG
CCGACGTTGG CCGAGGGGGA GACGGTGTCC GATCTCAAGG CCGATCGAAC CGCGTTCGAG
GAGTTCGACG TCGACGCCGC GGCCGCCCGC GGCTACGCCT ACGCCCAGTT GTCACAACTG
GCCTTCGAAC ATCTCCTGGG CGCGGCCTAA
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| Protein sequence | MVGKPVAEDK FSFGLWTVGW RAADPFGDAT RPELDVVETV HKLAELGAWG VTFHDNDLIP
FGSDEREREK RISRFRTALD ETGLVVPMAT TNLFTHPVFK DGALTSNDRD IRRFALRKVM
RNMDLAAELG ATTYVLWGGR EGSETDAAKD VRAAMDRYRE GIDTLAQYVV EQGYGLRLAL
EPKPNEPRGD ILLPTIGHAL AFISTLEHHE MVGLNPEVGH EQMAGLNFVH GIGQALWQGK
LFHIDLNGQH GPRYDQDLVF GHGDVLSAFF LVDLLEHGGY DGPRHFDYKP PRTEDIDGVW
ASAEANMRSY LLLRERAKAF RADPRVQEAL ERSRVPELAQ PTLAEGETVS DLKADRTAFE
EFDVDAAAAR GYAYAQLSQL AFEHLLGAA
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