Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_22000 |
Symbol | |
ID | 8387524 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 2369164 |
End bp | 2370606 |
Gene Length | 1443 bp |
Protein Length | 480 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644976253 |
Product | sphingosine/diacylglycerol kinase-like enzyme |
Protein accession | YP_003134035 |
Protein GI | 257056203 |
COG category | [I] Lipid transport and metabolism [R] General function prediction only |
COG ID | [COG1597] Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.00559373 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGTACA GCGCGGCACT CCCCCACACC CCTGCCGACA TCGCACTCGT CCGCCTCAGC CGTTGGGCGG ACAAGGGGCG ACTGTGGTGG TTCGTCGCCG CCCTCCTGGC CATCCGCAAG GGCCCGTCCC GCAGGGCGGC TCTCCGCGGA TTGGCCGCCC TCGGCATCGC CAGTGCCGTC GCCAACCTCG TCGGCAAACC CCTCCTACCC CGCCGCAGGC CCGCCGCCGA GGCCGTCCCC GAGGTTCGCC GCCTCCGCAT CCACCCCACG TCGTCGTCCT TCCCGTCCGG ACACGCCGCT TCCGCCGCCG CGTTCGTCAC CGCCGCGGCT CTCGAATCCC CCCGCCTCGG AGCCGCGCTC ATTCCGCTCG GCACGGCCGT CGCCTACTCC CGGCTGCACA CCGGTGTGCA CTGGCCCAGC GACATCGGCG CCGGAGCCGC CCTGGGCGCC TTCACCGCGT TGGCCACCCG CCACTGGTGG CCTCCGCACC CCGACGCCCG GGCGCACACC ACCCACCCCG CCGACGCACC GGCACTTCCT GAAGGAGAAC GTGTCCTCAC CGTCGTCAAC CGCAGCTCCG GCACCGCTTC CGACGACCCC ACCCCCACCA TCCGCGCCCG CTGGCCCCGC ACCGAACTGC TCCACACCGA GCCCGGCACC GAGCTACGGC TCCAACTCAC CGAGGAACTC CGCCACCACG GTGGACGCAT CCGCGCGCTC GGCGCCGCGG GCGGGGACGG CACGGTCGCG GCCGTCGCCG CCGTCGCCGC CGACCACGGC CTGCCCCTGG CCCTCATCCC CACGGGAACC CTCAACCACT TCGCTCGGGA CCTCGGCATC CGCGACCTCG CCGACACCGA CGTCGCGATC CGTGCCGGTA GCGCCGTGGG CATCGACCTC GGCGAGGTCG AGGTCGACAC CGACCACGAC ACCGTCCGCC GCCAGTTCAT CAACACCGCC AGCCTCGGCG GCTACCCCGA GATGGTGCGA CTCCGCGAAA CCATCGAACG CCACCACCCC AGATGGCCCT CGGCCATCGT GGCCATGGCC CGCACCCTCC GTCACGCCCG GCCCCTACGC ATCCGGTTGA ACGGCGAGGA CATGCTCGTG TGGCTGCTGT TCGTCGGTAA CGGCACCTAT GCCCCCAAAG GGGTCATCCC CTCACATCGG CCCGCGCTGG ACACCGGCCT GCTCGACGTG CGCTACCTCC GCGCCGACAA ACGCTACTCC CGGACCCGCT TCCTGCTCGC CGTCGTCACC AACACCCTCG CGACCAGTCA CGTCTACGCC CAACGCGACC TCGCCGAGGT CGACGTGGTC CTTCTCGACG GCAACCGTCG CATCGCCACC GACGGGGAGG TCGGGCCGCT GGGGCATCGT TTCCGCTTCC GCAGCCGTCC CAGCGCGCTG AGCGTCTACC GGCCACGCAC CCCCACACCG TGA
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Protein sequence | MRYSAALPHT PADIALVRLS RWADKGRLWW FVAALLAIRK GPSRRAALRG LAALGIASAV ANLVGKPLLP RRRPAAEAVP EVRRLRIHPT SSSFPSGHAA SAAAFVTAAA LESPRLGAAL IPLGTAVAYS RLHTGVHWPS DIGAGAALGA FTALATRHWW PPHPDARAHT THPADAPALP EGERVLTVVN RSSGTASDDP TPTIRARWPR TELLHTEPGT ELRLQLTEEL RHHGGRIRAL GAAGGDGTVA AVAAVAADHG LPLALIPTGT LNHFARDLGI RDLADTDVAI RAGSAVGIDL GEVEVDTDHD TVRRQFINTA SLGGYPEMVR LRETIERHHP RWPSAIVAMA RTLRHARPLR IRLNGEDMLV WLLFVGNGTY APKGVIPSHR PALDTGLLDV RYLRADKRYS RTRFLLAVVT NTLATSHVYA QRDLAEVDVV LLDGNRRIAT DGEVGPLGHR FRFRSRPSAL SVYRPRTPTP
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