| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_21680 |
|---|
| Symbol | |
|---|
| ID | 8387492 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | + |
|---|
| Start bp | 2333524 |
|---|
| End bp | 2334966 |
|---|
| Gene Length | 1443 bp |
|---|
| Protein Length | 480 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 644976221 |
|---|
| Product | acyl-CoA synthetase |
|---|
| Protein accession | YP_003134003 |
|---|
| Protein GI | 257056171 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.656623 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGTGTGC TCTTCCCCCC ATTGAACACA GCACGTTCCG AACCCGCCCT ACGGTTCGGT
GACCGCTTCC TGACCTACGG TGAACTCCGT GACGTCGCGG GCGCTTTGGC CCACCGGCTA
CGGAAACTAC CGGGTAAGTC GCCGCGGGTA GCCGTGTGGG CCACACCGAG TCCGGAGACC
GCTGTGGCCA CGGTCGCGGC CCTACTGGCC GGGATTCCCG CCGTGCCGAT CAACCCCAAG
ATCGGGGAAC GGGAGTTGAC GCACATCGTC TCCGACAGCG CACCCGCCCT CGTGCTCGCC
GAACCCGGTG CCACACTGCC GTCCGGCCTG GACACCGTGC GTCGCGAGGA CGTCACACTC
GAGGGGACGG CCGCGTCCCT GCCGGAAGAG CCGGACGAGG AATCGCCGGC GCTGATCATC
TACACCTCCG GCACCACCGG CCCGCCGAAG GGGGTGGTAC TGCCCCGGCG GGCCATCGCC
AGCACGATGG ACGCCCTTGC CGACGCCTGG CAGTGGACGG CCGACGACGT GCTCGTCCAC
GGCCTGCCCC TGTTCCACGT GCACGGACTG ATCCTCGGCA CCCTCGGGCC GCTGCGCCTG
GGCGGCAGCG TGCGCCACGT CGGCCGGTTC TCCCCCGAGG CCATCGCGGC GGAACTGGCC
ACCGGCGCCA CGATGATGTT CGGCGTCCCC ACGATGTATC ACCGGCTCGC CGACGAGGTG
GAACGCGATC CGAAACTCGC GGACGCCCTG CGTGGGGCGC GGCTGTTGGT GTCGGGGTCG
GCGGCGCTGC CCGTGCACGA CCACGAACGC ATCACCGCCG CGACCGGGCA ACGCATCGTC
GAACGCTACG GCATGACCGA GACCCTCATG AACACCAGCG TCCGCGCCGA CGGCGAGCGC
AGGCCGGGCA CCGTGGGCCT GCCGTTGCGT GGCGTCGAGC TGCGGCTCGT GGACGAGAAG
GGCGATCCCA TCGAGGTGTG GGACGGCGAG ACCGTCGGTG AGATCGAGGT GCGGGGCCCG
AACCTGTTCA CCGAGTACCT GAACCGGCCG GACGCCACGG CGGAGGCGTT CCACGATGGG
TGGTTCCGCA CCGGCGACAT GGCGGTTCGC GATCCGGACG GGTATGTGCG GATCGTGGGA
CGCAAGGCGA CGGATCTCAT CAAAAGCGGC GGTTACAAGA TCGGTGCCGG GGAGATCGAG
AACGCGTTGC TGGAGCACCC GGGGGTCGCC GAGGTGGCGG TCACGGGTGA ACCGGACAGT
GATCTCGGCG AGCGCATCGT GGCGTGGGTG GTCCCGCGCG GCACTCCGCC GAGCGAGCGC
GAACTGGCCG ATCACGTCGC GCGTCTGCTC ACGCCGCACA AACGCCCCCG AGTGGTGCGT
TACCTCGACG CGCTTCCCCG CAACGACATG GGCAAAGTCA TGAAACGGGC GCTCCATGGC
TGA
|
|---|
| Protein sequence | MSVLFPPLNT ARSEPALRFG DRFLTYGELR DVAGALAHRL RKLPGKSPRV AVWATPSPET
AVATVAALLA GIPAVPINPK IGERELTHIV SDSAPALVLA EPGATLPSGL DTVRREDVTL
EGTAASLPEE PDEESPALII YTSGTTGPPK GVVLPRRAIA STMDALADAW QWTADDVLVH
GLPLFHVHGL ILGTLGPLRL GGSVRHVGRF SPEAIAAELA TGATMMFGVP TMYHRLADEV
ERDPKLADAL RGARLLVSGS AALPVHDHER ITAATGQRIV ERYGMTETLM NTSVRADGER
RPGTVGLPLR GVELRLVDEK GDPIEVWDGE TVGEIEVRGP NLFTEYLNRP DATAEAFHDG
WFRTGDMAVR DPDGYVRIVG RKATDLIKSG GYKIGAGEIE NALLEHPGVA EVAVTGEPDS
DLGERIVAWV VPRGTPPSER ELADHVARLL TPHKRPRVVR YLDALPRNDM GKVMKRALHG
|
|---|
| |