Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_21210 |
Symbol | |
ID | 8387445 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 2280094 |
End bp | 2281665 |
Gene Length | 1572 bp |
Protein Length | 523 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644976179 |
Product | alkyl hydroperoxide reductase, F subunit |
Protein accession | YP_003133961 |
Protein GI | 257056129 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG3634] Alkyl hydroperoxide reductase, large subunit |
TIGRFAM ID | [TIGR01292] thioredoxin-disulfide reductase [TIGR03140] alkyl hydroperoxide reductase, F subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0675992 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.523116 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTTGACC CGGCACTAAC CAAGCAGCTC GCCCAACATC TCGAGCTTCT TCGGCAGCCG GTCGAACTAG TCGCGTCGCT GGACGACAGT GCCAAGTCCG CCCAGCTGAT GGAACTGTTG ACCGAGGTTG CCGCACTCTC GGAGAAGATC ACGGTGGTAC GCCGTGACGA CGACGAGCGT CGTCCGTCGT TCGCCATCGT CCGACCGGGA ACCGACATAT CGGTGCGGTT CGCCTGTGTC CCGCTCGGGC ATGAGCTGAC CTCCTTCGTG CTCGCTCTGC TCCAGGTCGG TGGACATCCC CCCGCGGTGT CCGAAGAGGT CATCGAGCAG ATCCGGCGGC TGGACGGCGA CTACGAGTTC GTCACCTACC TGTCACTGTC CTGTCAGAAC TGTCCCGAGG TCGTCCAGGC GCTCAACCTC ATGAGCGTGG TCAACCCGCG GATCAAGCAC GTGGCCGTCG ACGGTGCCCT GTTCAAGGAC GAGGTCGAGG CCCGGGGCGT GCTCGCGGTG CCCTCCGTGT TCCTCAACGG TGAACACTTC GAGCAGGGTC GGATGACCCT TGAGCAAATT CTGAGCAAAC TCGACAGTGG AGCCGCACAG CGGGCCGCTC AGGAGATCGG CAACAAGGAG CCCTTCGACG TGCTCGTCGT CGGTGCCGGG CCGGCCGGTG TCTCCTCGGC GATCTACGCC GCCCGCAAGA GTGTCCGCAC CGGGGTCGCC GCCGGCCGTA TCGGCGGTCA GGTGCTGGAC ACCATGGCGA TCGAGAACTT CATCTCCGTG CCCTACACCG AGGGGCCGAA GTTCGCCGCC GCGCTCGAAC AGCACGCCTC GGATTACGAG ATCGACATCA TGGACTCGCA GCAGGCCGTG CGGCTGGAGC CGGCGACACA GCCCGGTGAC CTGCACACGT TGGTGCTGGA AAACGACGCC ACGCTGAAGG GACGCACCGT CATCCTCGCG ACCGGCGCCC GCTGGCGTCC CATCGGGGTC CCGGGGGAGC AGGAGTACCG CAACAAGGGT GTGACCTACT GCCCCCACTG CGACGGCCCC TTGTTCCGCG GCAAGCCGGT CGCGGTGATC GGTGGTGGCA ATTCCGGAGT CGAGGCCGCC ATCGACCTGG CGGGGATCGT CTCGCACGTG ACGTTGCTGG AGCTCGGTGA CACGTTGCGA GCCGACGAGG TGCTGCAGCG CAAGCTGCGC AGCCTGACCA ATGTGGACAT CGTTCTCAAC GCGAAGACCA CCGAGGTCCT CGGCGACGGC ACCTCGGTAA CGGGCCTTAC CTACACCGAC ACCGAGACAG GCGAGAGCCG ACGGCTCGAC GTCCAGGGCG TGTTCGTGCA GATCGGCCTG CTGCCGAACA CCGAGTGGCT CGAGGGCGTC GTCGAGTTGA CCAAGCACAA GGAGATCGTC GTCGACGAGC GGGGCGCGAC CTCCGTGCCG GGAGTGTTCG CCGCGGGCGA CTGCACGACC GAGCCCTACA AGCAGATCGT GACGGCGATG GGATCCGGTG CGACCGCCGC CTTGAGCGCG TTCGACTACC TGGTCCGCAC CTCGGCTCCG ACCGACGACT GA
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Protein sequence | MLDPALTKQL AQHLELLRQP VELVASLDDS AKSAQLMELL TEVAALSEKI TVVRRDDDER RPSFAIVRPG TDISVRFACV PLGHELTSFV LALLQVGGHP PAVSEEVIEQ IRRLDGDYEF VTYLSLSCQN CPEVVQALNL MSVVNPRIKH VAVDGALFKD EVEARGVLAV PSVFLNGEHF EQGRMTLEQI LSKLDSGAAQ RAAQEIGNKE PFDVLVVGAG PAGVSSAIYA ARKSVRTGVA AGRIGGQVLD TMAIENFISV PYTEGPKFAA ALEQHASDYE IDIMDSQQAV RLEPATQPGD LHTLVLENDA TLKGRTVILA TGARWRPIGV PGEQEYRNKG VTYCPHCDGP LFRGKPVAVI GGGNSGVEAA IDLAGIVSHV TLLELGDTLR ADEVLQRKLR SLTNVDIVLN AKTTEVLGDG TSVTGLTYTD TETGESRRLD VQGVFVQIGL LPNTEWLEGV VELTKHKEIV VDERGATSVP GVFAAGDCTT EPYKQIVTAM GSGATAALSA FDYLVRTSAP TDD
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