Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_21020 |
Symbol | |
ID | 8387426 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 2252477 |
End bp | 2254507 |
Gene Length | 2031 bp |
Protein Length | 676 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644976160 |
Product | predicted acyltransferase |
Protein accession | YP_003133942 |
Protein GI | 257056110 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1835] Predicted acyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00110133 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.49378 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGATCA CGCAAACTCG CCCCATCGAG CAGAATCCCT CCTCGCAGAG TTCGGGACGT CGCTACCGCC CGGAGTTGCA GGGACTGCGG GCGTTGGCCG TGGTACTGGT CGTCGTGTAC CACGTGTGGC TGGGGCGGGT CTCCGGTGGC GTGGACGTGT TCTTCCTCAT CACCGGGTTT CTGATCACGG GGCAGCTGTT CCGGGCGAGT CTGCGCGGCG GGATCGAGTT CCGGCCGATG TGGGGCCGCA TGATCAAGCG GCTGTTACCG GCGTCCACGG TCGTGCTGTT GGCGACGATG GCGCTGGCGG TCGTGTTCCT GCCCGAACAG CGCTGGTTCG GCACCATCCG GGAAGTCGTC GCCTCTGCGC TGTTCTACGA GAACTGGGTC CTGGTCACGA CCTCCACCGA CTACTTCGCC GATCACGACA CGGCGAGTGT GGTCCAGCAC TTCTGGTCGT TGTCCATCCA GGGCCAGTTC TACCTGTTGT GGCCGCTGCT GATCGCGGTG GTCGCGCTGC TCGTGCGTCG GGCCGGGTGG AGCCTGCGCC GGACGGTTTT CGCCGTGCTG GTCGTGGTGT TCGCCGCTTC CCTGGCGCTG TCGGTGTGGC TGACGGCGGA GAACCAGCCG TTGGCGTACT TCATGACGCC GACGCGACTG TGGGAATTCG CGCTGGGCGG CATGCTGGCG CTCGTCATCG ACCGCGTGGC TCTGCCGAGG TTGCTCCGGA TCGTCCTCGG TTGGGTCGGC GTGGTGGGAC TGGTGCTGTG CGGTCTGGTG CTGACCGTCG GCCAGGTCTT CCCGGGCTAT GCGGCGCTGT GGCCCACGAT GTCCGCGGTG TGCGTGCTGC TGGCCGGGGC GACCGAGAGC AAGGTCGGCG CGGACCGGTG GCTGTCCTCC CGGCCGCTGG AGTACGTGGG CAACATCAGT TACGCGCTGT ATCTGTGGCA CTGGCCTTTG CTGGTGTTCT TCCTGCTCGC CACCGACCAG ACGGAACCGG ACATCGTCGG TGGTCTCGCC ATCATCGGAG TGTCGTTCGC GCTGTCGGCG GCGACCTATC ACTTCGTCGA GCAGCCGGTG CGGAATTCCC GCATCGGTCA GACCACGCGG TGGGGGGCGT ACCGGTTCGG GGTCGTGGCG TTGGTCCCCG TGTTGGCCGC GGCCGTCGTG TGGCAGGTGG TGAGCACGAA CCGGGCGTCC TTCGCGCCCG TGCTCGACGA CCCGCGCTAC CCCGGTGCGC AGGTGATCGC GGCGGGCATT CCCTCGCCGG AGACGGGTGG GTCGGTGGTT CCACCGTTCG CGGCGTTGCC GGACGAGTGG GTGGCCTTCT CCGACGACGA GTGTCGGATC TCGCCGCGCA ACGAGGACCT GCGCATCTGC ACGGTCGACC CGTCCGGTCC GCCGGTGCGA CGGATCGCGG TGGTGGGCGA CTCGCACTCC CAACAACACA TCGCCGCGTT GATCCCCAGC GTGGAGAAAC GAGGCTGGCA GATCATCTCG ATCGGTAAGG GTGGGTGCCC GCTGACCGCC GACCCGAACT GGCCGGAGGA CAACTGCCCG GAGTGGAACG AGGCCGTCAT CGCCGAACTG GCCGAGATGC GTCCCGACGT GGTGGTGACG ATGGCCACCC GGGACGTGCG GTTCGGGCTG CAGGAGCGTA CGCCGGAAGG CTACGTGGAG CAGTGGCGCA AACTCGCCGA CCTGGGCATA CCGGTGGTGG CGCTACGGGA CCACCCCCGC TACGACTACG ACCCGTCGGA GTGTGCGCAC CAGAAGGGGA TCGACGCGCC CGAATGCATG GGACGCAAGG CTGACTACTA TCCCCCGGAA CCACCCTACG CCTCGATCCC GGACATCCCT CCGACCGTGT CGTTCGTGGA CTTCAGTGAC TACTTCTGCG CCGACGGGGT GTGTCCACCG GTGATCGGCA ACGTTCTCGT CTACCTCGAC GACAACCACG TGACCGCGAC CTATCTGGAG ACCCTGGCAC CGCAGATGGA GCAGGAGTTG AGCGCGGCCC TCGGGTGGTG A
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Protein sequence | MTITQTRPIE QNPSSQSSGR RYRPELQGLR ALAVVLVVVY HVWLGRVSGG VDVFFLITGF LITGQLFRAS LRGGIEFRPM WGRMIKRLLP ASTVVLLATM ALAVVFLPEQ RWFGTIREVV ASALFYENWV LVTTSTDYFA DHDTASVVQH FWSLSIQGQF YLLWPLLIAV VALLVRRAGW SLRRTVFAVL VVVFAASLAL SVWLTAENQP LAYFMTPTRL WEFALGGMLA LVIDRVALPR LLRIVLGWVG VVGLVLCGLV LTVGQVFPGY AALWPTMSAV CVLLAGATES KVGADRWLSS RPLEYVGNIS YALYLWHWPL LVFFLLATDQ TEPDIVGGLA IIGVSFALSA ATYHFVEQPV RNSRIGQTTR WGAYRFGVVA LVPVLAAAVV WQVVSTNRAS FAPVLDDPRY PGAQVIAAGI PSPETGGSVV PPFAALPDEW VAFSDDECRI SPRNEDLRIC TVDPSGPPVR RIAVVGDSHS QQHIAALIPS VEKRGWQIIS IGKGGCPLTA DPNWPEDNCP EWNEAVIAEL AEMRPDVVVT MATRDVRFGL QERTPEGYVE QWRKLADLGI PVVALRDHPR YDYDPSECAH QKGIDAPECM GRKADYYPPE PPYASIPDIP PTVSFVDFSD YFCADGVCPP VIGNVLVYLD DNHVTATYLE TLAPQMEQEL SAALGW
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