| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_20980 |
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| Symbol | |
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| ID | 8387422 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 2245845 |
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| End bp | 2247284 |
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| Gene Length | 1440 bp |
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| Protein Length | 479 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644976156 |
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| Product | amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit |
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| Protein accession | YP_003133938 |
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| Protein GI | 257056106 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.705121 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.164362 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGACG AGGAGTTGTG TTTTCGGTCC GCGACCGAGC TGGTCCAGTT GCTTCACCGC
CGGGAGTTGT CGGCCCGTGA ACTGCTGGCG GCACATCTAC AGCGCATCGA GACGATCAAC
CCGAAGATCA ATGCGATCGT GACCTTGGTT CCCGAACACG CGGAGCGTGC CGCCGCGGCC
GCCGATGAGG CGATCATGAG CGGTGAACCC TTGGGCCCGT TGCACGGACT TCCGGTGGCG
CACAAGGATC TCACCGAGAC CAAAGGCATC CGCACCACCT ACGGCTCACC GGCGCGGGCG
GACCACGTCC CCGACGTCGA CAGTGTCGTG GTGGAAAGCC TGACCAAGGC CGGCGCGGTG
ACGGTGGGCA AGACCAACAC CCCGGAGTGG GGCACCGGTT CCCAGACGTA CAACGCCGTC
TTCGGCGTCA CCCGCAACCC CTACGACCTG TCCAAGACCT CGGGTGGAAG CAGTGGCGGC
GCGGCCGCCG CGTTGGCGGC CCGGCTCGTG CCGATCGCCG ACGGCACCGA CATGGGCGGG
TCACTGCGTA ATCCGGCGAG CTTCTGCAAC GTGGTGGGCC TACGCCCCTC GGTGGGCCGG
GTGCCGGTGT GGCCGAGCGC CGACCCGATG TTCACCTTCG CCGTGGCCGG GCCGATGGCG
CGCACCGTCG CCGACGTGGC GTTGCAGATG CGGGTGCTGG GCCGACCGGA CCCGCGGTCA
CCGCTGTCAC ATCACGTGCC CGCCGAACGC TTCGCCGACT CGCTGGAGCG GGACTTCACC
GGAACGTCGG TCGCGTGGAG CGCCGACCTG GGCGGTCTTC CGGTGGACGA GCGGGTGGTC
CAGGCGATGG CCCCCGCCAG GGAGGTGCTG ACCGACCTGG GCTGTCAGGT CGCCGACCGT
GACCCGGACA TGACCGGTGC CGACGAGGTC TTCCGCACGT GGCGGTCCTG GTACTACGTG
TTGACGCTGG ACGAGCTGTA CCGGGAACAG CCGGAGGCGT TCGGTGCCAG CACCGCGTGG
AACATCGAGG TCGGTCGCAA GGTCACGGCC GAGGACCTCG TGCGGGCGCA GCGTCTCCGC
ACGGCCCTCT ACCACCGGAT GCGCGAGTTC CTCGACACCT ACGAGTTCTT GGTGACCTTG
GTGTCGCCCG TGCCGCCCTT CGACGTCGAG ACGAAGTATC CCGAAAGCGT GGCCGGGGTG
GCCTCCGAAA GCTACCTGGA CTGGATGCGC GCCTGCTACT GGATCTCCGC CACCGGCCTG
CCCGCGGCCT CCGTGCCGTT CGGGTTCACC CCCGAAGGAC TGCCCGTGGG GTTGCAGATC
GTCGGCCGCC CCGGTGACGA CTTCGGGGTG CTGCAGCTCG CGCACGCGAT CGAGGGCGCC
ACCCAGGCGG GTCAGCGACT CCCGGACCTC ACCGATTCGA CCACGTCGAA CGCGTCCTGA
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| Protein sequence | MPDEELCFRS ATELVQLLHR RELSARELLA AHLQRIETIN PKINAIVTLV PEHAERAAAA
ADEAIMSGEP LGPLHGLPVA HKDLTETKGI RTTYGSPARA DHVPDVDSVV VESLTKAGAV
TVGKTNTPEW GTGSQTYNAV FGVTRNPYDL SKTSGGSSGG AAAALAARLV PIADGTDMGG
SLRNPASFCN VVGLRPSVGR VPVWPSADPM FTFAVAGPMA RTVADVALQM RVLGRPDPRS
PLSHHVPAER FADSLERDFT GTSVAWSADL GGLPVDERVV QAMAPAREVL TDLGCQVADR
DPDMTGADEV FRTWRSWYYV LTLDELYREQ PEAFGASTAW NIEVGRKVTA EDLVRAQRLR
TALYHRMREF LDTYEFLVTL VSPVPPFDVE TKYPESVAGV ASESYLDWMR ACYWISATGL
PAASVPFGFT PEGLPVGLQI VGRPGDDFGV LQLAHAIEGA TQAGQRLPDL TDSTTSNAS
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