Gene Svir_20910 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_20910 
Symbol 
ID8387415 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2236303 
End bp2236827 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content65% 
IMG OID644976149 
Productaerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS-like protein 
Protein accessionYP_003133931 
Protein GI257056099 
COG category[C] Energy production and conversion 
COG ID[COG2080] Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.670207 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.00505863 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAGCGAGG AACTGCACGA GGTACGCCTG CACGTCAACG GCACCGTCCA CCAGGTTCGG 
TTACCCGCCA GACGGTTGCT CAGCGACGCC CTGCGCCACG ACCTGCGGTT GACCGGAACC
CATGTCGGGT GCGAACACGG CGTGTGCGGC GCGTGCACGG TGCTCGTGGA CGGCAAACCG
ATGCGCTCGT GTCTGATGTT CGCGGTCTCC GCACAGGACT ACGAGATCAC CACCGTCGAG
GGGTTGACCG AGGCCGACGG CTCCTTGAGC CCGGTACAGC AGGCGTTCAA GGACTGTCAC
GGCTTGCAAT GCGGTTTCTG CACCCCCGGA TTCCTCACCA CGATCACCGC TGGTTTGGCG
GAGAACCCCC GGCCGACACG TGAGGAGGCC AAGGAGATGA TCGCCGGCAA CCTGTGCCGG
TGCACCGGCT ATCAGAACAT CGTCTCCGCG GTGTGCCGGG CCGCCGAACT CGCCGCACGA
CGACGCGATG AGGCTGCACG AGAGCGGGAA GAGAGCACAT CGTGA
 
Protein sequence
MSEELHEVRL HVNGTVHQVR LPARRLLSDA LRHDLRLTGT HVGCEHGVCG ACTVLVDGKP 
MRSCLMFAVS AQDYEITTVE GLTEADGSLS PVQQAFKDCH GLQCGFCTPG FLTTITAGLA
ENPRPTREEA KEMIAGNLCR CTGYQNIVSA VCRAAELAAR RRDEAARERE ESTS