| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_20890 |
|---|
| Symbol | |
|---|
| ID | 8387413 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | + |
|---|
| Start bp | 2234052 |
|---|
| End bp | 2235425 |
|---|
| Gene Length | 1374 bp |
|---|
| Protein Length | 457 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 644976147 |
|---|
| Product | xanthine/uracil permease |
|---|
| Protein accession | YP_003133929 |
|---|
| Protein GI | 257056097 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG2233] Xanthine/uracil permeases |
|---|
| TIGRFAM ID | [TIGR00801] uracil-xanthine permease |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.433718 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.0375498 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCAAGT GGGACGTTGT CCACGGAGGA AAGGCCCCGC CACGGGGTGC GTCGGTCGGG
CCGTTGGAAC GGCTCAGCTG GGGACGCACG CTGGGGCTCG GCGCGCAGCA CGTGGTGGCG
ATGTTCGGCG CCACGTTCGT CTTCCCCGTG GTGATGGGGT TGGACCCCAA CCTTGCGATC
ATGTTCTCGG GGATCTGCAC GATCATCTTC CTGCTGATCG TGCAGAACCG GGTCCCCAGT
TACCTGGGGA CCAGCGCGGC ATTCGTGGCC GCCGTGGCCG CGATCCGCGA ACAGGGCGGC
GATTCGGCCC ACGTGACCGG CGCGATCCTG GTCGGCGGCC TCGTTCTGGC GCTGATCGGC
GTGATCATCC ACATCGGTGG CGCACGGATC ATCCACAAGG TGCTCCCGCC CGCGGTCACC
GGAGCGGTGA TCATGCTCAT CGGGTTCAAC CTCGCACCCG TGGTCGCGGG CACCTACTGG
CACCAGGATC AATGGGTCGC ACTCGCCACG GCCACGTTCA TGGTGCTCGC GGCGGTGCTG
CTGCCCGGTT TCTGGTCCCG TATCGCGGTG TTCCTCGCCC TGGTGTTCGG CTATGTCATC
TCCTGGCTGG CCGATCTGCT CTTCGGTGAG ATCACGTCGG TGTTGCCGGA CAGCGGAGGC
GAAGCGGTCC CGCACCCGCG GGTCTCCTGG GACGAGGTGG CGACCGCGGA CTGGATCGGG
CTGCCCAGCG GCACGCTCGC CGACGGTGTC CCCGTCATCC ACGCACCCTC GTTCTCCCTG
ACCTTCATCC TGCTGGTCCT GCCCGGAGTG ATCGCGTTGG TCGCGGAGAA CACCGGTCAT
GTCAAGGCGG TCGCGGAGAT GACGGGAGAG GACCTCGACC CCTACATGGG ACGTGCCATC
GGAGCGGACG GCATCGCCAC CGCGTTGGCG AGCGCGTTCG GTGGTTCACC GACCACCACC
TACGCCGAGA ACATCGGCGT CATGGGCACC ACCCGGGTGT ACTCCACGGC CGCCTACTAC
GCGGCCGCCC TCGTGGCCAT CCTGCTCGGC CTGTGCCCCA AGTTCGGCGC CGTCATCAAC
GCCGTCCCCG GAGGGGTCCT CGGCGGCATC ACCATCGTCC TTTACGGAAT GATCGGCCTG
GTCGGAGCCA AGATCTGGGT GGAGAACCGC GTCGACTTCG GAAACCCCGT CAACCTCATC
GGACTCGCGG CGGGCCTGAT CGCGGGGATC GGCGGCGTCA GCTTGTCCTT CTCCGAACAT
TTCGAGCTCG GAGGCATCGC CCTGGGCACC ATCCTGGTGA TCGTGTACTT CCACCTGGTC
AAGGGGCGGG GGCAGAAGCC GGGCTCAGCC GAGGAGGTGA CCCAAAACCC ATGA
|
|---|
| Protein sequence | MFKWDVVHGG KAPPRGASVG PLERLSWGRT LGLGAQHVVA MFGATFVFPV VMGLDPNLAI
MFSGICTIIF LLIVQNRVPS YLGTSAAFVA AVAAIREQGG DSAHVTGAIL VGGLVLALIG
VIIHIGGARI IHKVLPPAVT GAVIMLIGFN LAPVVAGTYW HQDQWVALAT ATFMVLAAVL
LPGFWSRIAV FLALVFGYVI SWLADLLFGE ITSVLPDSGG EAVPHPRVSW DEVATADWIG
LPSGTLADGV PVIHAPSFSL TFILLVLPGV IALVAENTGH VKAVAEMTGE DLDPYMGRAI
GADGIATALA SAFGGSPTTT YAENIGVMGT TRVYSTAAYY AAALVAILLG LCPKFGAVIN
AVPGGVLGGI TIVLYGMIGL VGAKIWVENR VDFGNPVNLI GLAAGLIAGI GGVSLSFSEH
FELGGIALGT ILVIVYFHLV KGRGQKPGSA EEVTQNP
|
|---|
| |