Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_19680 |
Symbol | |
ID | 8387295 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 2099602 |
End bp | 2100846 |
Gene Length | 1245 bp |
Protein Length | 414 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644976031 |
Product | predicted acetamidase/formamidase |
Protein accession | YP_003133813 |
Protein GI | 257055981 |
COG category | [C] Energy production and conversion |
COG ID | [COG2421] Predicted acetamidase/formamidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0111175 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTGAGG TCAAATTCCG TGTCGATCAG TCCCGGTTGT TCGCCGAGCA GGAGGTGTTA GGGCATAACC GGTGGCATCC GGATGTGCCG CCGGTGGCGA CGGTGCGTCC GGGTGAGGAG TTCCGGTTGG AGTGCCGGGA GTGGTTCGAC GGCGCGATCC GTAACGACGA TTCGGCCGAT GACGTCCGGG ATTGCGATTT CACTCAGGTG CACAAGTTGT CGGGGCCGAT CGCGGTGGAG GGCGCTGAGC CGGGCGATCT GCTCATGGTG GACATCGTGG ATTTGGGGCC GGTGCCGCAG GAGAAGGGGC CGGTGGCTGG TCAGGGCTGG GGGTATACGG GGATTTTCGC TCGGGAGAAC GGCGGCGGGT TCTTGACCGA TCATTTCCCG GGTGCGTACA AGGCGGTGTG GGATTTCCGT GGTCAAACGG CGACGTCCCG GCATATTCCG GGGGTGTCGT TCGTGGGGAT CGCGCACCCG GGGTTGATGG GGACGGCTCC GTCGGCGGAG TTGTTGGCGC GGTGGAACAA GCGGGAGGGC GATCTGATCG CGACGAATCC GTCGCGGGTT CCGCCGTTGG CGTTGCCGCC GACCGCGGAG AATGCGGTGT TGGGTTCGTT GTCGGGTGCG GAGTTCGAGC GGGCGGCGCA GGAGGCGGCG CGTACCGCTC CCCCGCGGGA GAACGGTGGG AACCAGGACA TCAAGAACCT GTCGCGGGGT TCGCGGGTGT TTTATCCGGT GTTCGTGCCG GGTGCGAAGT TGTCGGTGGG TGATCTGCAC TTCAGTCAGG GTGATGGGGA GATCACCTTC TGTGGTGCTA TCGAGATGGG CGGCTACATC GATCTGCATG TCGATGTGAT CAAGGGTGGG ATGGAGGCTT ACGGCGTGGA GACGCCGGTG TTCATCCCGG GTCGGGTGGA GCCGCGGTAT TCGGAGTATC TGGCGTTCGC GGGGTTGTCG GTGACGGAGT CCGGTGAGCA GCGGTATCTG GATTCGCACT TGGCGTACCA GCGGGCGTGT TTGAATGCGA TCAACTATTT GACCAAGTTC GGGTACACGC CGGAGCAGGC GTATCTGTTC TTGGGTGCGG CGCCGATCGA GGGTCGGTTC TCGGGTGTGG TGGATATTCC GAACTCGTGT GCGACGGTGT ACATCCCGAC CGAGGTGTTC GATTTCGATC CGAGGCCGTC GGCGGGTCCG CCGAAGCGGG TGGATCGGGG TCAGTGTGCG GTGAGCAGTC GCTGA
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Protein sequence | MPEVKFRVDQ SRLFAEQEVL GHNRWHPDVP PVATVRPGEE FRLECREWFD GAIRNDDSAD DVRDCDFTQV HKLSGPIAVE GAEPGDLLMV DIVDLGPVPQ EKGPVAGQGW GYTGIFAREN GGGFLTDHFP GAYKAVWDFR GQTATSRHIP GVSFVGIAHP GLMGTAPSAE LLARWNKREG DLIATNPSRV PPLALPPTAE NAVLGSLSGA EFERAAQEAA RTAPPRENGG NQDIKNLSRG SRVFYPVFVP GAKLSVGDLH FSQGDGEITF CGAIEMGGYI DLHVDVIKGG MEAYGVETPV FIPGRVEPRY SEYLAFAGLS VTESGEQRYL DSHLAYQRAC LNAINYLTKF GYTPEQAYLF LGAAPIEGRF SGVVDIPNSC ATVYIPTEVF DFDPRPSAGP PKRVDRGQCA VSSR
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