| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_19630 |
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| Symbol | |
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| ID | 8387290 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 2091593 |
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| End bp | 2093563 |
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| Gene Length | 1971 bp |
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| Protein Length | 656 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644976027 |
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| Product | heavy metal-translocating P-type ATPase, Cd/Co/Hg/Pb/Zn-transporting |
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| Protein accession | YP_003133809 |
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| Protein GI | 257055977 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2217] Cation transport ATPase |
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| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01512] heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00267622 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.0638812 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCGACG CCTGCGGCTG CGGCAGCGAC GAGCCCCGCA CCGGCGAGGA AGAAGAGCGC
GAGCCGGAAC GGCTCTGGCA GGTCAGCGAA CTGCGCTTCG CCGCGATCGC CGGGGTGCTG
CTGCTGGCCG GATACGCGGT GGAGTGGGCC GGGGCGGGCT CCACACTGGC GCTGGCCCTG
AAGGCGCTGG CCTTGGTCGC CGGGGCCTAC ACCTTCGTGC CCTCCACGCT GAAGCGACTG
GCCCAGGGCA AGATCGGGGT CGGCACCCTG ATGACCATCG CCGCGGTCGG CGCGGTGATC
CTGGGTGAGG TCGGCGAGGC CGCGATGCTG GCCTTCCTCT ACTCCATCAG CGAGGGCCTG
GAGGAATACT CCCTGGCCCG CACCCGCCGC GGGCTGCGGG CGCTGCTGTC CCTGGTCCCC
GAGGAAACCA CGGTGCTGCG CAACGGCAGC GAGACCGTGG TGGCCCCGTC CGAGTTGCGG
GTCGGGGACC GGATGCTGGT CAAGCCCGGG GAGCGCATCG CCACCGACGG CGTGATCCGC
ACCGGCCGCA CCGCGCTGGA CGTCTCCGCG ATCACCGGCG AGTCCGTGCC GGTCGAAGCG
GGCCCCGGCA GTGAGGTGTT CGCCGGGTCG ATCAACGGCA CCGGGGTGCT GGAGGTCGAG
GTCACCACGA CCTCCGAGGA CAACTCACTA GCGCGGATCG TGCGGATCGT GGAGGCCGAG
CAGTCCCGCA AGGGCGCCAG CCAGCGCCTG GCCGACCGCA TCGCCAAACC CCTGGTGCCC
GGCGTCATGA TCGCCGCCGC GCTCATCGCC GGAATCGGCA GCCTCCTCGG CGACCCGACC
ACCTGGATCG AACGCGCCCT GGTCGTGCTC GTGGCCGCCT CACCCTGCGC GCTGGCGATC
TCCATCCCCG TCACCGTCGT CGCCGCCATC GGTGCCGCGA GCAAGCACGG TGTGCTGGTC
AAGGGCGGCG CCGCGCTGGA GGCCCTCGGC CGCGTGCGGG GGGTGGCGCT GGACAAGACC
GGCACCCTGA CCCGCAACCA GCCCGCCGTG GTCGACGTCG CCACCACCGA CGGGACCCCG
CGCGAGCGGG TGCTCGAGCT GGCCGCGGCG TTGGAGGCCC GCAGCGAACA CCCCCTGGCC
CGCGCGATCC TCGCCGCCGT CGACGGCGAG ACGATCACCC CCGCGGCCGA CGTGGAGGCG
GTCACCGGCG CCGGGCTGAC CGGCCAGCTC GACGGCCGCC CGGTGCGGCT GGGCCGCCCC
GGCTGGCTGG AAGCCGGGCC GCTGGCCGCC GAGGTGCAGC GCATGCAGCA GGCCGGGTCC
ACCGCCGTGC TCGTCGAGGA CGACGGCCGC GTGATCGGCG CGATCGCCGT GCGCGACGAA
CTGCGCCCCG AAGCCGCCGA GGTCATCACC CGGCTGTGCT CCGGCGGCTA CCACGTCGCC
ATGCTCACCG GCGACAACCA CGCCACCGCC ACCGCCCTGG CCGCCGAAGC CGGTATCGAC
ACCGTGCACG CCGAACTCCG CCCGGAGGAC AAGGCCCGCA TCATCAGCGA ACTGGGCGAC
CGGCGATCGA TGGCGATGGT CGGTGACGGT GTCAACGACG CCCCCGCCCT GGCCACCGCC
GACCTGGGCA TCGCCATGGG CGCCATGGGC ACCGACGTCG CGATCGAAAC CGCCGACGTC
GCCCTCATGG GCGAAGACCT GCGGCACCTG CCCCACACCC TCGACCACGC CCGCCGCGCC
CGACGGATCA TGCTGCAAAA CGTCGGACTC TCCCTCGGGT TGATCATCGC TTTGATGCCG
CTGGCGCTGT TCGGCGTCCT CGGCCTGGCC GCGGTGGTGC TGGTGCACGA GGTGGCCGAG
GTCGTGGTCA TCGCCAACGG GGTGCGCGCC GGCCGCGCCA AGCCGCTGCC CACACTGCCC
GGCGGCAAGC CTGTGGCGGA GCGGCCCGCG ACAGTGGGGG CCTCGGCGTA A
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| Protein sequence | MSDACGCGSD EPRTGEEEER EPERLWQVSE LRFAAIAGVL LLAGYAVEWA GAGSTLALAL
KALALVAGAY TFVPSTLKRL AQGKIGVGTL MTIAAVGAVI LGEVGEAAML AFLYSISEGL
EEYSLARTRR GLRALLSLVP EETTVLRNGS ETVVAPSELR VGDRMLVKPG ERIATDGVIR
TGRTALDVSA ITGESVPVEA GPGSEVFAGS INGTGVLEVE VTTTSEDNSL ARIVRIVEAE
QSRKGASQRL ADRIAKPLVP GVMIAAALIA GIGSLLGDPT TWIERALVVL VAASPCALAI
SIPVTVVAAI GAASKHGVLV KGGAALEALG RVRGVALDKT GTLTRNQPAV VDVATTDGTP
RERVLELAAA LEARSEHPLA RAILAAVDGE TITPAADVEA VTGAGLTGQL DGRPVRLGRP
GWLEAGPLAA EVQRMQQAGS TAVLVEDDGR VIGAIAVRDE LRPEAAEVIT RLCSGGYHVA
MLTGDNHATA TALAAEAGID TVHAELRPED KARIISELGD RRSMAMVGDG VNDAPALATA
DLGIAMGAMG TDVAIETADV ALMGEDLRHL PHTLDHARRA RRIMLQNVGL SLGLIIALMP
LALFGVLGLA AVVLVHEVAE VVVIANGVRA GRAKPLPTLP GGKPVAERPA TVGASA
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